Chiloscyllium punctatum (brownbanded bambooshark): 140483925
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Entry
140483925 CDS
T11285
Symbol
rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140483925 (rnf123)
Enzymes [BR:
cpun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140483925 (rnf123)
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140483925 (rnf123)
Multi subunit type E3
KPC complex
140483925 (rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
140483925
NCBI-ProteinID:
XP_072438862
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All DBs
Position
12:complement(71805989..72208804)
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AA seq
1306 aa
AA seq
DB search
MWKMTSKGTSTSYSRRSYRLASDTEKPKVTGFVNDKLLSNYLHRAFPSSESTQLSASSRK
PLNFQNLSEHLDRLLSEGLDNEAEDKDQNMVGRLGPATVVLDHTSGFEGLLLVDDDLLGV
VGHSNFSSIRATSCVYKGKWMYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTSDSYAYDG
NRVRKWNVTTTNYGKAWAAGDIVTCVIDLDEGKIAFCLNGISLGNAFQDIRLGPGIAYFP
AISLSFKESVAFNFGSRPLRYPVEGYRPMQDPPEADLVKAHRLLGYLKNVISASMDTQEG
KLIEQDSAQWQAQGEPTVLITLAHIFDRFAPLMCKVYLVEDVLMTYFLSILEGGGAVDEH
PLIQHLLDLMWLFMEDYEIQECLKQLMMSLLRAYRFSPIIPDLGLQIHYLRLSIAILKHE
KTRKYLLSNVLFDVLRSVVFFFIKTPLRVEEAGLEELIPTTWWPTRFDKEGKEVKEETAE
ERLRRRAYERGCQRLKKRIEVVEELQVQILKLFLNNKDKGSGEASRYIFLNKFRKFLQEN
ASNRGNPAILCPPEYMVCFLHRLIAALRSYWDEYRRRNPSAMPSEDAYVPPQLFFNGKVD
YFDLQRLGGLLSHLKKTLKDDLASKANIIIDPAEISAISMDDLDEDDESVTQQRPSGAAA
GAGGLARPSWLSSPTLGRANRFLSTAAVSLMNPRRSLTTVEKVKVRTLSVEQRTEEDIEG
SHGNDGLLLGRPPDEPDHLITEKSLLEILDGAIMMYNLSVHQQLGKMVGVSDDVHEYAVA
LKDTEDKIARCPAKRKDILDELTKSQKVFSAKLNHLSRRLAWINATIYSKEKMLDIYWLL
QVCIRVIEHSDRTKTLFAFMPEFYMNVAMNSYSALKNYFSPVNSMDELPEYQETLSRLAA
ILAKHFADPRIVGTDIKDSLMQALASYVCYPHSLHAVERIPEEQRVAMMKNLLAPYEQRP
WAQTNWILVRLWRGCGFGYRYTRLPHLLKSKPEDANMPSLQKPCPSTLLQQHMADLLRSD
SEMAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDSRQLKVCATCFDLSVSLL
RVLEMTITLVPEIFLNWSRPSAELLLRRLAQLINQVLNRVTAEKNLFDRVVNLRLPGLES
VDHYPILVAVTGILVRILVDSDVQGIQRATAVLLADPCFQLRSIQYLLGENELVALGAAP
PSAEKKHFSLQAYPDYISLEELGKVESVLSHLTRESKQAAATALPTSEEDLCPICYAHPI
SAIFRPCSHKSCKACINQHLMNNKDCFFCKATITAVDDYTKPSSSS
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaatgacgtctaagggcaccagcacatcctactccaggagaagttatcggctg
gcctctgacacagaaaaaccaaaggtcacaggttttgtgaatgacaaactcctcagcaac
tacctccaccgtgcttttcccagctctgagagcacacagttgtctgcttcatccaggaag
ccgctgaactttcagaacctgagtgaacatttagatcgtctgctctctgagggattggac
aatgaagcagaagacaaagatcaaaatatggttgggcgccttggaccagccactgtggtc
ctggatcacactagtggttttgaggggttgctgcttgtggatgatgatttacttggggtt
gttggtcacagtaacttcagctcaatcagagctacctcgtgcgtgtataaaggaaaatgg
atgtatgaagttctgatctcatctcaggggttaatgcagattggttggtgcaccctaaac
tgcaggtttaatcaagaggagggcgttggtgatacgtcagattcttacgcctacgatggg
aatagagtgcgcaagtggaacgttaccacaactaattatggaaaagcttgggcagccggt
gatattgtcacatgtgtgatagacctggacgaagggaagattgcattctgcttaaatggg
atctccttgggaaatgcatttcaagacatcagattgggtcctggaatagcctacttccca
gcaatcagtctatccttcaaagaatcagtggcattcaactttgggagccggccactccga
tacccagtagaaggctatcgcccaatgcaggatccaccagaggcagatcttgtgaaagcc
cacagactcctgggatacctaaagaatgtgatctctgccagtatggacacccaggaaggg
aaactgatcgagcaggattctgcacaatggcaagcccagggggagcccactgtgctcatt
acacttgcacatatctttgaccgctttgcaccccttatgtgtaaagtgtacctcgtggaa
gatgtattgatgacctattttctgagtatactggagggaggtggggctgttgatgaacac
ccactaattcaacacctactggatctcatgtggctcttcatggaggattatgaaatccag
gaatgtttgaaacagctgatgatgtcactgcttcgtgcgtacagattttctcccatcatt
cccgatttagggttacagatccactacttgcgcctgagcatagctattctaaagcacgag
aaaaccaggaaatatctgctcagcaacgtcttatttgatgtgctgcgatcagtggtgttt
tttttcattaagacgcccctgcgggtggaggaggcaggcttggaggagcttattcccacc
acttggtggccaaccaggtttgacaaggagggcaaggaggtgaaggaggaaactgctgag
gagaggctgagacgtcgggcctatgaacgtggctgccagcgattaaagaaacgtattgag
gttgtggaagagctacaggttcagatcctgaaattatttctcaacaacaaagataaagga
tcgggtgaggcatccagatacattttccttaataagttcagaaagtttttacaggagaat
gctagtaatcgagggaatcctgcaatcctttgccctcctgaatatatggtatgcttcctg
caccgactgattgctgctttgcgaagttactgggatgagtacagacggaggaatccatca
gcaatgcccagtgaagatgcttatgttccccctcagctgttttttaatgggaaggtggat
tactttgacctgcagaggcttggtggccttctttcccatctgaagaaaacactgaaagat
gatcttgcatccaaagccaatatcatcattgatcctgcagagatctctgccatttcaatg
gacgacttggatgaggatgatgagagtgtaactcaacagaggccgagtggtgctgctgca
ggtgcaggaggtctcgccaggccgagctggttaagttcaccgacgctggggcgagccaat
aggttcctaagcactgcagctgtgagtttgatgaatccccgccgatccctgaccacagtg
gaaaaggtgaaggttcgtactctgagtgtggagcagagaacagaggaggacattgaagga
agccatgggaatgatggcctgttgttagggcgtccccctgatgaaccagatcacctgatc
accgagaaatctttactggaaattctggatggtgctatcatgatgtacaacctgagtgtg
caccaacagctcggcaagatggtaggtgtgtcagatgatgtccatgaatatgcagtggca
ctgaaggacactgaagacaagattgcaagatgtcctgcaaagaggaaggatattctggat
gaattgacaaagagtcagaaagtcttctcagcgaagctgaaccacctgagtcgccggtta
gcctggataaatgctaccatctactctaaggagaagatgctagacatctactggctgctt
caagtgtgcatacgagtaattgaacatagtgaccggaccaagacactgttcgctttcatg
ccagagttctacatgaacgttgctatgaatagctacagcgctttgaagaattacttcagt
ccggtcaacagcatggatgaactacctgagtatcaggagacgttgagtcgattggcagct
atcctcgccaagcactttgctgatcctcgaattgtgggaactgatattaaggattcactg
atgcaggctcttgccagctacgtctgctacccccactccctgcacgctgttgaacgtatc
ccagaggaacaacgtgtggctatgatgaagaatcttctagctccatatgaacagcggcca
tgggctcagaccaactggatccttgtgcgactctggaggggatgtggattcggatatagg
tacacacgactccctcacttactgaaaagtaaaccagaagatgccaacatgccaagcctg
cagaaaccttgtccttctactttgctgcaacaacacatggctgacttgcttcgctctgac
tccgaaatggcagccagtttcctgaatagtgtcctcaaccagctgaactgggccttctca
gagttcatcggcatgattcaggagatccagcaggcagccgaacgaccagagcgaaacttt
gtcgacagtcggcagctgaaagtgtgtgccacctgctttgatctttctgtgagcttgcta
agggtcctggagatgaccatcactctcgtccctgagatcttcctgaattggtccagacca
tccgcagaactgctactgagacgcctcgcacagctgataaaccaagtattgaaccgagtt
acggctgaaaagaacctcttcgaccgcgttgtcaatctgcgcttacctggtttggaaagt
gtggatcattacccaatcctcgtagctgtaacgggaattcttgtccgaattctggttgac
tctgatgttcagggcatccaaagagcaacagccgtcctcctggctgacccctgcttccaa
ctgaggtcaatacagtatctgcttggagaaaatgagctcgtggccctgggagcagcaccc
ccatcagcggaaaagaagcatttctccctccaagcatacccagattatatcagcctggaa
gagctggggaaagttgaaagtgttctctcccatttgacacgggaatccaagcaggcagca
gctactgcactgcccaccagtgaggaagacctgtgcccaatctgttacgctcaccccatc
tctgccatcttcaggccatgttcacacaaatcctgcaaggcctgcatcaaccagcatctg
atgaacaacaaagattgtttcttctgcaaggccacgatcactgcagtggatgattataca
aaaccatcctcctcctcctag
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