Chiloscyllium punctatum (brownbanded bambooshark): 140485736
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Entry
140485736 CDS
T11285
Name
(RefSeq) short transient receptor potential channel 3-like isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpun04040
]
140485736
Ion channels [BR:
cpun04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140485736
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
140485736
NCBI-ProteinID:
XP_072440314
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Position
14:39540625..39731444
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AA seq
928 aa
AA seq
DB search
MSEEDRRCQAQITVSFYEEENRRNWKEKNGDLSSQYSNPIAEDRKTHGYSDTMQSVSNPS
VMQRRMTVLREKGRRQAVRGPAFMFNDRGTSLTPEEERFLDAAEYGNIPVVRRMLEESKS
LNVNCVDYMGQNALQLAVGNEHLEVTELLLKRDNLARIGDALLLAISKGYIRIVEAILNH
SGFEPSNRLALSPCEQEMQDDDFYAYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGA
RIEKPHDYFCKCNECVEKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVHTALELSNE
LAKLANIEKEFKLKNKKNELVKCPHSVTSSNDYRKLSMQCKDFVVGVLDLCRDSEEVEAI
LNGDMEAEQDEGHHSQRAGLTRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQPI
AMKCLVVLVIALGLPFLAIGYWIAPCSKLGKMLRSPFMKFVMHAASFIIFLCLLVFNASD
RFEGIKTLPNVTVIDYPKQVFRMKTTMFTWTEMLIMVWILGMMWTECKEIWTEGPREYIF
QMWNLLDFGMLSIFIAAFTARFLAFLEASKAQQYVDEHVEENDLSLVTLPPEVEYYTYAR
DRWVPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIM
VFLAFMIGMFILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENI
GYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWLFYFDHGKTLPPP
FSLVPTPKSCISLILKIKNCLINLFKCRRKRLKRDVEIGMLNSKSRLNLFAQSNLRISET
QSFNSIMNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDK
SQATEELAFLIQKLGEKLNTCLTKQKHQ
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggaagatagaaggtgtcaggctcagataacagtctccttttatgaagaggaa
aaccggcggaactggaaagagaagaatggggatttgagttcacaatattccaacccaatc
gcagaagacaggaaaacacatggatactccgataccatgcaaagtgtaagtaacccatct
gtaatgcagcggagaatgacagtgctacgggagaaaggaaggagacaggccgtccgtggt
ccagcattcatgttcaatgacaggggcacaagccttactccagaagaagaacgttttctg
gacgcagctgaatatgggaacatacctgttgttcggcgaatgctggaggagagcaagtca
ctgaatgttaattgtgttgattacatggggcagaatgcccttcagctagcagttggaaat
gaacatttggaagtaactgagctccttctaaagagggataatttggctcgaattggtgat
gcattattgcttgctatcagtaagggatatatacgaattgtggaagcaattttgaatcat
tctggatttgagcccagtaatcgactggccctcagcccttgtgagcaagaaatgcaagat
gatgatttttatgcttatgatgaagatggcactagattttctccagatatcactccaatc
attctggctgcccattgccaaaaatacgaggtggttcatatgttgttgatgaaaggagca
cgaattgagaaacctcacgattatttctgtaaatgcaatgaatgtgtggagaaacaaaag
catgattcatttagtcactccagatcaaggatcaatgcgtacaaaggattagcaagccct
gcctatttgtctttgtctagtgaagatccagtacacactgcactggaacttagtaatgaa
ttagccaagttggcaaatattgaaaaagaatttaagcttaaaaacaagaaaaatgaattg
gtaaagtgtccacacagcgtgacatcatcgaatgactatcggaagttatctatgcaatgc
aaagactttgttgttggtgttcttgacctgtgccgagacagtgaagaagttgaagccatt
ctgaatggtgacatggaggctgagcaggatgaaggacaccacagtcaaagagcaggatta
acacgtgtcaaactggccattaagtatgaagtcaaaaagtttgttgcacacccaaattgc
caacagcaactactcacaatatggtatgaaaacctttcagggttgcgggagcagcccata
gctatgaaatgccttgtggtgctcgttattgcgcttgggctcccatttcttgcaattggc
tattggattgcaccttgcagcaagctggggaagatgctaagaagtcccttcatgaagttt
gtgatgcatgcagcatccttcatcatctttctgtgtttactagtatttaatgcctctgac
agatttgaaggcatcaaaaccttacccaatgtcactgttatcgattaccctaaacaagtc
ttcagaatgaaaactactatgtttacctggacggaaatgctaattatggtgtggatactg
ggaatgatgtggactgagtgtaaagaaatctggacagaaggaccacgggaatacattttc
caaatgtggaatcttttagattttggaatgttatccatttttattgctgcatttacagca
agattcctggcatttctggaagcttctaaagcacagcagtatgtagatgaacatgttgag
gagaacgatctatcacttgtaacacttccaccagaagttgaatattacacttatgccaga
gatagatgggtgccttctgatcctcagatcatatcggaaggcctctatgcaatagctgtt
gttcttagtttttcacgaatcgcttatattctgcctgcaaatgaaagttttggtccatta
caaatttcccttggaaggacagtgaaagacatattcaaattcatggtcatttttattatg
gtatttcttgctttcatgattgggatgtttatcctgtattcctactatcttggtgcaaaa
gtaaatccggccttcacaacagttgaagaaagtttcaagacactattctggtcaatcttt
ggtttgtctgaagtatcttctgttgtcctcaaatatgaccacaaattcattgagaatatt
ggatatgttttatatggaatatacaacgtcactatggtggtggtcttgctcaacatgctg
attgccatgatcaatagctcatatcaagaaattgaggatgatgcagatgtggaatggaaa
tttgctcgatcaaagctatggcttttctactttgaccatgggaaaaccttgccccctcca
ttcagtcttgtgcctactccaaaatcgtgcattagtttaatactaaaaatcaaaaactgt
ctcattaatctattcaaatgcagaaggaaacgattgaagagagatgtagagattggaatg
ttgaattcaaagtctaggctgaatctttttgcacagtcaaatctaaggatttcagaaact
caaagtttcaacagcattatgaatcaaccaacaagatatcagcaaataatgaaacgactg
atcaaacgatatgtcttgaaagctcaagttgacaaagaaaatgatgaagttaatgaaggt
gaactgaaagaaattaaacaggatatctcaagccttcgatatgaacttctagaagacaaa
tctcaagcaactgaggagctggctttcctcattcaaaagcttggtgaaaaactgaatacc
tgtctgacgaaacaaaaacaccagtga
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