Chiloscyllium punctatum (brownbanded bambooshark): 140486470
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Entry
140486470 CDS
T11285
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140486470 (ttc3)
Enzymes [BR:
cpun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140486470 (ttc3)
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140486470 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
TPR_1
TPR_2
zf-RING_2
TPR_11
zf-rbx1
TPR_12
TPR_16
CARD
zf-C3HC4_2
zf-C3HC4
TPR_8
TPR_17
ANAPC3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
FANCL_C
DUF555
Motif
Other DBs
NCBI-GeneID:
140486470
NCBI-ProteinID:
XP_072441783
LinkDB
All DBs
Position
15:complement(83557358..83686683)
Genome browser
AA seq
1946 aa
AA seq
DB search
MMDSTIMDDSSSDSDDSKTIVHHQIRFMSEAISEKYCQIKPKNNMEAAHIWCSVIPVNNQ
VHWHTIAINLLWPYLFAQAEKVDRCLQWAFAAKFIDAENYDVFEMNIVKLQNIELLEAVV
EAIQKHHRSTTFLSCLLDLWNEIDKNNYDLNKVIEMIENTGEFNTLRVEVNSGTKRSRMS
AIAIVCFQYAYIVKMVLGGENILNLVPKGDHQKSEEYKKKGNEEFKNENYEAAVSWYSKA
IDLRPDNQILYGNRALCFSRIENYGKALGDGKRAIVLKPNWPKGHYRLCDALFSMGEHKQ
AIDANVKAQELCKDVSDGIRDLIQQKEKFLKKLQDENHRRSKTDGLKEEANIKKEQSKVP
IKPVFESHKNEAKRNQERNGMRSRLPHHPEKMLMPVNNSNSMMNELKSLIHDGHIALSDK
RAHNAKYAFLKVLNLVNPEKLGEASLSTSEYVIIIYGHACALLGIGLPEELTEAENQFNK
ILEQFPEQRLDCLAFYGLGKVYFRQNRFADALDPFTKSLIMVNRKIVPGILTWPTTTVVI
EETQAEKLKAMLEEYIEKCRFPPVPDAICRYQHCQGHSKVQIYFTDPDFKGFIQVMCCLQ
CCVGYHINCWKKLKAASFEDKNDKEFLRSQCFTPDCGGQISKIVIFNSKGLVKCEFEIKI
TKSKDPAKTVVKQKCSSALKLKIKEDRKQSRKQLKKEASRYNAEKQIKEKTEKNSKNDET
NSKTGHSWNPLGDRMLQLITENKEQLKAGVQNVSNLLQELLSFHVLSEQDYDILCAGSSK
SCQIMGQLLDLIVQKNNRIKTREFLYTLSKCQEVDNKLLDWINWLNDAGSEAAELFLSRY
SNCIEQLDLNSLLELLDASKIDLPFSDSTKEIVEQLKQESPTKTRSFIWMLEEKREQFPS
LHVPLDEYFNTMDAPYTVLKKQENEELSNIGLRSKIRNRKKKPKDSKPFLLLSGSVRTGA
REEDDDEIFSDDGILTQMSSAVPFTIPEHLRVQLENFEDSYDSQVYGNHYQRVLDNNPDP
TRESLYDYFAQILNEHGPMEIDNPMLVGEFENFPPEAQELVRKTGGLKSFLMESLRFVVI
NNLIGLMKHAVQLKSLAINEKAAARGTEESEINSDEVSNENLRPMAHLNPTAKEFKPVSF
HQSSLSCPSVTSSLSEIQNPNQHIHYDTDVQINLSTDNMYMNINPYSDARPDIHSSDMSL
LNHNSVTSNSLTDHYLNAVAPAAQSSSNPTFCNDVSSTHIPSDIPQAIPNFSNLSFTNYN
YQFHSLNSDEGCNPMANEMEHMRLSSSANTTVMGALEEMPQSNFKLEDTNGASSKINSSE
SDTSYNKHEIKRGPLLRTIAVQAHQESLCNTNINTDPLQPFENQQGDILRIEKEHHVLQK
QLQEAEEKYDQLANRSRDEITALEEKMSELVKRNELLKSELDLLRQDLESEIKKSQQEKR
ENNDNLKILKSKVKSLADLNQMHSENIQENKQLYEKRLQEFEQMSNQSSREKKKLEEAIR
KSDDMYQETNKRATDAEVSVLESWWRTQLFSHYRAADDAKCMINKLKALTRSPIPTNPQR
QMSVAAWKTFLFTINQQINQSETDLNNQLTRLKNGAHLSSLPPISIPSLPAPPNSSMLLE
NDDPAIIASFSSASKELQMQNQIVSISQASAAATQKPLAALMQAAPTTAEATAKASPVTS
VTFSLQSQSSLNQIQHDSSLTKPQSAWIPVNNRSGTHIVPEIATSPDTLHSTSQPANATS
LQPKSSFDKIISRLLTMFPHYSSTHLTNFIKEVRNANGGSLSGLVCDEIINRVAELILDH
QDKAKVQVAPATFQLPATLVQQKPTSDFGASHTLPAASSEGLRPTTVSAARNARSQPWKV
NKVQTASQWHESTPPTFDDEPCIICHEDLTPDTMCVLQCKHHFHKMCIKKWLKENSTCPT
CRVHALLPEDFPELSGMIKNIQAYPF
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atgatggattccacaatcatggatgattccagctcagactcagatgacagtaagacgatc
gtccatcatcaaattagatttatgagtgaagcaatatctgaaaaatattgtcaaattaag
ccaaaaaataatatggaagctgctcacatttggtgttctgtcattccagtaaataatcag
gtgcattggcatacaatagccataaacttactatggccatatttatttgctcaggcagag
aaggttgatcgctgtcttcagtgggcctttgcagcgaaattcatagatgcagagaattat
gatgtctttgaaatgaatattgtaaagctccaaaatattgagcttctggaagcagtggtt
gaggcaatacagaaacatcatcgttctacaacatttctgtcctgtttattagatttatgg
aatgaaatagataagaataattatgacctcaataaggtcattgaaatgatcgaaaacaca
ggagaatttaatactctgcgtgtggaagtgaactctggaaccaaacgatcacggatgtca
gctattgcaattgtctgctttcaatatgcatatattgtaaagatggtcttaggtggtgaa
aatattcttaatttagtgccaaaaggagatcatcagaaaagtgaagaatataaaaaaaaa
ggcaatgaagaatttaaaaatgaaaactatgaagctgcagtaagctggtactccaaggca
attgatttaaggcctgataatcaaattctgtatggaaatcgagcgctctgcttctcacga
attgaaaattacgggaaagcacttggtgatggaaaacgagccattgtattaaaacctaat
tggcccaagggtcattatcgtctgtgtgatgccttattttcgatgggagagcacaaacaa
gccatcgatgctaatgttaaagctcaggaattatgcaaagatgtttcagatggaattcga
gatttaattcagcagaaagaaaagttccttaaaaagctgcaagatgaaaatcatagaaga
tcaaagactgatgggttaaaagaagaagcaaacatcaaaaaagagcagtcaaaggtacca
attaagccagtatttgaaagccacaagaatgaggccaagagaaaccaggaaagaaatgga
atgagatcacgtcttccacaccatccagaaaagatgctgatgcctgtaaataactcaaac
agcatgatgaatgaattgaagtctctgattcatgatgggcatatagccttatcagacaag
cgtgcccacaatgcaaaatatgccttcttaaaggtgctgaacctagtgaatcctgaaaaa
ctaggggaagcatctttgtccactagtgaatatgtgataattatctatggtcatgcctgt
gccctccttggtattggattacctgaggagctgactgaggctgaaaatcaatttaataaa
atcttggagcagttcccagagcagcggcttgattgtttggcattctacggcctgggcaaa
gtgtacttccgacagaacagatttgctgatgctttagatcctttcactaaatccttaatt
atggtaaaccgtaagattgttccaggcatactaacatggcccacaacaactgttgttatt
gaagaaacacaggctgaaaaattaaaggctatgttggaagaatacatagagaaatgccgg
tttcctccagtacccgatgcaatctgccgctatcaacattgccagggacattctaaggtc
cagatctacttcacagaccctgattttaagggttttattcaagtaatgtgctgcctccag
tgttgtgtgggatatcacatcaattgctggaagaaattgaaagcagcttcctttgaagat
aaaaatgacaaggaatttctcagaagtcaatgtttcacgcctgactgtggaggacagatt
tcaaaaattgttatctttaattcaaaaggtcttgtgaaatgcgagtttgagattaaaata
actaaaagcaaagaccctgcaaaaacagttgtgaagcagaaatgttcaagtgcattgaaa
ttgaaaattaaagaagatcgtaaacaatcccgaaaacagttgaaaaaagaagcttcaagg
tacaacgctgaaaaacagataaaagaaaagactgaaaaaaatagcaaaaacgatgaaacc
aattctaaaacaggtcattcatggaatcctctaggcgatcgaatgttgcagctgataact
gagaacaaggaacagttaaaagctggggtgcagaatgtttcaaatctacttcaagaattg
ctttcatttcatgttctaagtgaacaggattatgacatactttgtgcaggttcctccaaa
tcatgccagattatgggccaacttcttgacctcattgtacaaaagaataacagaataaaa
accagggaattcctctacacactgagcaagtgccaagaggttgacaacaagctgttagat
tggatcaattggttaaatgatgcaggcagtgaagcagctgagctgtttctgagtcgttac
tcaaactgcatagagcagttggacttgaactctctactagagttgttggatgcatcgaag
attgatctcccattctctgatagcactaaagaaattgtagagcagttgaaacaggaatca
cctacaaaaacccgcagttttatatggatgttggaggaaaaaagagaacaatttccatcc
ctacacgttccgttagatgaatattttaatacaatggatgctccttatactgtactaaag
aaacaggagaatgaagaattatctaatattggccttaggagtaaaattagaaacagaaaa
aagaaaccaaaggattccaagccttttctccttctgtctgggtcagtcagaactggagcc
cgtgaggaggatgatgatgaaatattctccgatgatggcatccttacacaaatgagctct
gcagttccttttacgataccagaacaccttcgtgttcagcttgagaattttgaagatagt
tacgattctcaagtttatggcaatcattaccagcgggtcctagacaataatccagaccca
acacgtgaaagtctgtatgattactttgctcaaattctgaatgaacatggtccaatggaa
attgataacccaatgttagttggagaattcgaaaacttcccaccagaggcccaagagctg
gtgcgaaagacaggtggcttgaaatcattccttatggaatcactgcgatttgtggtgatt
aacaatctgataggactgatgaagcatgcagtacaattgaagagcttggctataaatgaa
aaagcagcagcaagaggcactgaagaatccgagattaactcagatgaagtttctaatgaa
aacctacgtccaatggctcatctcaaccccaccgctaaggaatttaaacctgtgtctttt
catcaatcatctttatcatgtccatcagttacaagttcactaagtgaaatacaaaaccct
aatcagcatatacattatgatactgatgtacaaattaatctttcaacagataatatgtat
atgaatattaatccatattctgatgcaagaccagatattcatagctcagatatgagctta
ttgaatcataattcggtaactagcaattcactcactgatcattacttaaatgcagtcgct
cctgctgctcaatcatcttctaatccaacgttctgcaatgatgtatcatccactcatata
ccttctgatataccacaagcaatccctaatttttcaaatctatcttttactaattataat
tatcagtttcattctctcaattctgatgaaggatgtaaccccatggcaaatgaaatggaa
catatgagactgtcatctagtgctaatacaacagtaatgggtgcacttgaagaaatgcct
cagagcaattttaaacttgaagatactaatggtgcatcaagcaaaataaacagcagcgag
tctgatacaagttacaataagcatgaaattaaacgaggtccattgctaaggactattgca
gtacaggctcatcaggaatctttatgtaataccaacatcaatactgatcctttacagcca
tttgaaaatcaacagggtgatattttgagaattgagaaagagcatcatgttctgcagaaa
caactgcaagaagcagaagaaaaatatgatcagcttgcaaaccgaagcagagatgaaatt
actgcacttgaagaaaagatgtctgaattagtaaagcgaaatgagttactaaaatctgag
cttgacttgttacgccaagacttggaaagtgaaatcaagaagagtcaacaagaaaagcga
gaaaataatgataacttaaaaatactcaaatcaaaagttaaatcacttgctgatttaaat
caaatgcacagtgaaaatattcaggaaaacaaacaactttatgagaaacgtttacaagaa
tttgaacaaatgagtaatcagtcatcaagagaaaagaagaagctggaagaagccattaga
aagagtgatgacatgtaccaagaaactaataaaagagcgactgatgcggaggtgtctgtg
ctggagagctggtggagaacacagctcttttcccattatagagcagctgacgatgccaaa
tgtatgataaataaattgaaggcacttaccagaagcccaatcccaactaatccacaaaga
caaatgtcagttgcagcctggaaaacatttctatttacaatcaaccaacaaatcaatcaa
agtgagacagaccttaataaccagttgactcggttaaagaatggagctcatctaagcagc
cttccaccgatctctattccaagtcttccagcacctccaaactctagcatgctactggag
aatgatgatcctgccattatagcatctttctcttctgcaagtaaagaattgcagatgcaa
aaccagattgtgtctatttcacaagcctcagctgctgcaacacagaaacctctggcggct
ttaatgcaagcagctccaacgactgctgaagcaacggctaaggcttcacctgtaacatct
gtaacattcagcttacaaagccagtcttccttaaaccaaattcaacatgacagttctttg
acaaagccacagtctgcctggataccagtaaataatagatcaggcacacacattgtacca
gaaattgcaacgtctcctgatactctgcattcaacaagtcaacctgcaaatgcaacatct
ctgcaacccaaaagcagctttgataaaatcatcagccgtcttttgaccatgtttcctcat
tattcaagcacccatctgactaatttcattaaagaggttcgtaatgcaaatggcggttcc
ctttctggattagtatgcgatgaaataattaatcgagtggcagaactcattttggatcat
caggacaaagcaaaggtccaagttgcgcctgccacctttcaactgccagcaacccttgtt
caacaaaagccaacgtctgactttggtgcttcacacacactacctgcagcatcaagcgaa
ggtttgagaccaactactgtttcagctgctagaaatgcccggtcacagccttggaaagtg
aacaaagttcagactgcctcgcaatggcatgaaagcactcctccaacatttgatgatgag
ccatgtattatttgtcatgaagatttaacaccagacactatgtgtgtgcttcaatgcaaa
catcacttccataaaatgtgtatcaagaaatggctaaaagagaacagcacttgtccaaca
tgtcgggttcatgctctcctgcctgaagattttcctgaactgtctggaatgataaaaaat
atacaagcatatcctttttaa
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integrated database retrieval system
