KEGG   Chiloscyllium punctatum (brownbanded bambooshark): 140487978
Entry
140487978         CDS       T11285                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
cpun  Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpun00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    140487978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cpun03000]
    140487978
   04121 Ubiquitin system [BR:cpun04121]
    140487978
   03036 Chromosome and associated proteins [BR:cpun03036]
    140487978
Enzymes [BR:cpun01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     140487978
Transcription factors [BR:cpun03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    140487978
Ubiquitin system [BR:cpun04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     140487978
Chromosome and associated proteins [BR:cpun03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    140487978
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     140487978
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box JHD JmjC Cupin_8 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 140487978
NCBI-ProteinID: XP_072443561
LinkDB
Position
17:73866999..74090065
AA seq 1306 aa
MVPGADSGDFFFPFHFRPLPSNTTHKPPFAVLISEGNRPDIERTFCRRRYDNEDLSDDDI
ASMRTFDVEEKLSIASYNSSYVHFMKGKDFTLEYVQRETIKVPIIFRDKDGLGIKTPDSD
FSVRDVKLFVGSRRVVDVMDVSTQKGIEMSMSQWVKYYETPEMEREKLYNVISLEFSHTK
LENLVKRPNVVDLVDWVDNMWPRHLKEKQMDSTNAIAEMKYPKVQKYCLMSVKGCYTDFH
IDFGGTSVWYHILRGGKVFWLVPPTSHNLEIYEEWVLSGKQGDIFLGDRVDGCQRIELKQ
GYTFLIPSGWIHAVYTPVDTLVFGGNFLHSFNIPMQLHIYGIEDRTRVNAKFRYPFYYEM
CWYVLERYVFCLTKRSYLTKQYQRESMLIDTEKKPNTESPSSDSRLDMDEESSDVRIKEE
KDETRDKMSLQSTKAFGDDSPSPNSAHSEGNESTGKTPKMTKRLKRTLSNDSDDSTKSPM
LTDCPKTPSGSPDPSQPASEGSNKWIHLTEFELKGLKALVEKLESLPENKKCVPEGIEDP
YALLEDMKTVLEEHADDDQKLAITGVPIVTWPKKAVKHRAVGRPKGKLGTSAAVKLAANR
ATAGARRRRTRCRKCEACRRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAV
CLICGEAGKEDTVEEEEEKFNFMLMECSICNEIVHPGCLKVKQLKVQDGDGVVNEELPNC
WECPKCNHEGKTGKVYKQKRGPGFKYASNLPGSLLKEQRQNREQKDSAETTKKKGDREEN
SKRRSEEHPKKRPEESVPRRKSEDGLVMRKRRITDRNSEPIARKKFKIGKEEKLLRKKKK
SLQPSEDHPTIVKTLRTIKQEPEDDPSETPQKTKESDQSRSSSPRAGPSTESAEAKEKKS
ERFKEKRKKRLHNKELSKELSKELNQEIHKTETSLANENHQPIKSEGEGEKVEKPKRLPA
SSERLHRLSKGLNGTPRLRHHLTTSLRRAPRVITRPPPSVSPTKSIQMERHVVRPPPVSP
PPDSLPLDDGEDHVMQREVWMAVFGYLSRKDLCICMRVCKTWNRWCCDKRLWTKIDLNRC
KSITPLMLSGIIRRQPVTLDLSWTNISKKQLTWLINRLPGLKDLVVSGCSWAAISALCSS
SCPLLRTMDLRWVEGLKDAQMRDLLSPPTDNRPGQIDNRSKLRNVVDLRLAGLDITDATL
RLLIRHMPTLSRLDLSYCNHLTDQSINLLTAVGTTTRDSLTDVNLSVCNKVTDQCLTYFK
RCGNICRIDLRYCKQVTKEGCEQFIAEMSVIVQFNLSEEKLLQKLS
NT seq 3921 nt   +upstreamnt  +downstreamnt
atggtgccgggggcggactctggggattttttttttcccttccattttcgaccccttcca
tcaaacacaacacacaaacctccctttgcagttctcatttcagaaggaaatcgacccgac
atcgaacgcacattttgtagaaggcggtatgacaatgaggacctctcagacgatgacata
gccagcatgaggacttttgatgtggaggaaaagcttagtattgcctcatacaattcaagt
tacgtgcactttatgaaaggaaaagattttacccttgaatatgtgcagagagagactatc
aaggtccccattatcttcagggacaaagatggtctaggaatcaaaacaccagatagcgat
ttcagtgtcagagatgtaaaactatttgttgggagtcgccgtgttgtggatgtcatggat
gtgagtacccagaaaggaattgagatgagtatgtcacaatgggttaaatactatgaaaca
ccagaaatggaaagagagaagctgtataatgtcatcagcctggaattcagtcatacaaaa
cttgagaatctggtcaaacggcccaatgtggttgacctggtggattgggtggacaacatg
tggccacggcatttaaaagagaagcaaatggactccacaaatgcaatagcagaaatgaaa
tatccaaaagttcagaagtactgcttaatgagcgtcaaagggtgctacacagattttcat
attgattttggtggcacttctgtctggtatcatattcttcgaggagggaaggtattctgg
ttagttcccccgacttcgcacaatctggagatttatgaagagtgggttctgtcgggaaaa
caaggtgatattttccttggggacagagtggacggatgccaacggattgagttaaaacaa
ggatatacatttttgattccttcaggatggatccatgccgtatacactccagtagatacg
ttggtttttggtggaaattttctgcacagctttaatattcctatgcaacttcatatctat
ggaattgaggatcgaactcgggttaatgccaagttccgctatcctttctactatgaaatg
tgctggtatgtcctggaaagatatgtgttctgtttgacgaaaaggtcttatctcaccaaa
caataccagagggaatcaatgttaattgatacagagaagaaaccaaatacagagagtcct
tcatcagattcccgtctagatatggatgaagaatcttctgatgtacgaatcaaggaggag
aaagatgagacgagagacaaaatgagccttcaaagcacaaaagcatttggtgatgattcg
ccatctcctaacagtgcacattcagaaggaaatgaaagcactggaaagacaccgaaaatg
acaaagcgtttaaagcggactttgtccaatgattcagatgacagcactaagtcaccaatg
ctgacagactgtccaaaaacaccaagtgggtctcctgacccatctcagccagcatctgaa
ggatctaataaatggattcaccttacagaatttgagttgaaagggttaaaagcacttgtg
gaaaaactggaatctttgccagagaataaaaaatgcgtccctgaagggatagaagatcct
tatgcccttctagaggatatgaagactgtactggaggaacatgctgatgatgatcagaag
ctggctatcaccggggtcccaattgtaacatggccaaagaaggcagtgaagcatagagca
gtaggaaggccaaaaggaaagcttggaacttctgcagctgtgaagcttgctgcgaacagg
gctacagctggagcgcgcaggaggagaacaaggtgtcgaaaatgcgaggcatgccgaaga
acagaatgtggggagtgccatttctgcaaggacatgaagaagtttggaggaccagggaga
atgaagcagtcctgtatcatgaggcagtgcattgctccggtcctgccacatacagcagtc
tgtctcatttgtggagaagcaggaaaggaggacactgtggaagaagaggaggaaaagttc
aattttatgctgatggaatgctcaatttgtaatgaaattgtgcatcctggctgcttaaag
gtaaagcagttaaaggtacaggatggcgatggagttgtcaacgaagagcttccaaactgc
tgggaatgtccaaagtgtaaccatgagggaaagacagggaaagtctataagcagaaaaga
gggccagggtttaagtatgcctccaacctcccgggttcactattgaaggagcagaggcag
aacagagaacaaaaggactctgcagagacgacaaagaaaaagggagaccgagaggaaaat
tccaaacggagatcagaggaacatcccaagaaacgacctgaagaatctgttccaagaagg
aaatctgaggatgggcttgtgatgcggaagcggagaattactgatagaaattctgagcca
attgcccgaaaaaagtttaaaattggaaaggaagagaaactgttgaggaagaagaaaaaa
tccttgcagccaagtgaagatcacccaacaattgtcaaaacattgcgaactatcaagcag
gagcctgaagatgatccatcagagacacctcagaaaacaaaggagagtgaccagtctagg
tcaagctctccaagagctggtcccagtactgaaagtgcagaggccaaagaaaagaaaagt
gagaggtttaaagagaaacgcaagaagcgattgcacaataaagaacttagtaaagaacta
agcaaagaactcaatcaggagattcataaaactgagaccagcctggcaaatgagaatcat
caaccaattaaatctgaaggagagggtgaaaaagtagagaagcctaaacgattgccggca
agcagtgaaagacttcacagattaagcaaaggattaaatgggactcctaggcttaggcat
caccttaccacgagcttgaggcgggctcccagggttatcactagacccccaccctctgtg
tcaccaactaagtccattcaaatggagcgacatgttgtgcggcctccccctgtcagccca
cccccggactctctgccccttgatgatggtgaagaccatgtcatgcaacgagaagtgtgg
atggctgtgtttggctacctcagtcgaaaagatttatgcatttgcatgagagtctgtaaa
acctggaacagatggtgctgtgacaagaggctttggaccaagattgatttaaaccggtgt
aaatcgatcacaccccttatgctcagtggcatcattaggaggcaacctgtaactcttgac
ctgagctggacaaatatatcgaaaaagcagttaacttggcttatcaacagattgccaggt
cttaaggacttggttgtttcaggctgctcctgggcagcaatctctgcactttgcagctct
agttgtccattgctgagaactatggatcttagatgggtggaaggattaaaagatgcccaa
atgagagatttgctttctcctccaacagacaacagaccaggtcaaattgacaatcgcagc
aagctacgaaatgtggtagaccttcgtctggctggactggacattacagatgcaacactc
cggcttcttattagacacatgccaacattatccagactggaccttagttactgcaatcat
ctgacagatcaatcaattaacctattaacggcagttggcactacaactagagattcctta
acagatgtcaatctatcagtttgcaataaagtcactgaccagtgcctaacctatttcaaa
cgttgtggtaatatctgccgaatagacctccgttactgcaaacaggtaacaaaagaaggt
tgtgaacaattcatagcagaaatgtctgttattgttcagttcaatttgtcagaggaaaag
ctgttacaaaaactcagttaa

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