Chiloscyllium punctatum (brownbanded bambooshark): 140489380
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Entry
140489380 CDS
T11285
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04620
Toll-like receptor signaling pathway
cpun04621
NOD-like receptor signaling pathway
cpun04622
RIG-I-like receptor signaling pathway
cpun04623
Cytosolic DNA-sensing pathway
cpun05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140489380 (irf3)
04621 NOD-like receptor signaling pathway
140489380 (irf3)
04622 RIG-I-like receptor signaling pathway
140489380 (irf3)
04623 Cytosolic DNA-sensing pathway
140489380 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140489380 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140489380 (irf3)
04131 Membrane trafficking [BR:
cpun04131
]
140489380 (irf3)
Transcription factors [BR:
cpun03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
140489380 (irf3)
Membrane trafficking [BR:
cpun04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
140489380 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
140489380
NCBI-ProteinID:
XP_072444976
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Position
18:96872578..96899009
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AA seq
457 aa
AA seq
DB search
MGSQKPLLCDWLIEQINSGLYPGLYWLNAEKTRFQIPWKHRSRHDVSEDDFKIFEAWAIA
SGRYKPGIDVPDPIVWKRNFRSALNRKKHFHRVVDSRNNSERPHLIYEIRSIGQQSGASA
EEESEEVSPAIDSASPGLSSGSSPNVQGTLESSLRDMTIFDWESGGSEEGTMMELGAALY
PSDYAPDYAVAPNNLSQIDPSGQPTAGADAACAMPLAVEGPNMVIPNVGEFQTQMRGYFQ
NGHLATEFEITIYYRGKRVKEQTLKNINGFRLFYTSESKFPYLEDLQFPEAVSCLTDQQQ
IMYTNVLLDGMGQGLTVEVNNNQICAQRHGNCRTFWSMTENPSSKEPRQISSRELTVLYD
LPQFHQELCAFLNSERGSPQYSIWLCFGELWPDCGDRPWSKKMIMVQVTPITFKLLHELA
HGVGASSLTGDSINLQLSDPLSSSSLLSILEQCMDVE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggttcccagaagccgttgttgtgtgattggcttattgagcagataaacagtgggctg
taccctggcctctattggctgaatgcggagaaaactcgattccagatcccctggaaacat
cgctcgaggcacgacgtttctgaagatgacttcaaaatatttgaggcttgggcgatagca
agtggccgatataagccagggattgatgttcctgacccgattgtatggaagagaaatttt
cgcagtgctctgaatcggaagaagcattttcaccgcgtggttgacagtaggaataattct
gagagacctcacctgatttatgagatccggagcattggccagcagagtggggccagtgcc
gaggaggagagtgaggaagtcagtcctgccattgacagcgccagccctggactctcctcg
ggctcatccccaaacgtgcaggggaccctggagagcagtttgcgagacatgacgatattc
gactgggagtcagggggcagtgaagaaggaaccatgatggaactgggagcagccctgtat
ccttcggactatgctccagactatgctgtggctccaaacaacctgagtcaaatagacccc
agtggccagcccactgccggtgcagatgctgcctgtgcgatgccacttgcagtcgaaggt
cccaacatggtcatcccaaacgttggcgagtttcaaacacagatgaggggctatttccag
aatggacacctcgcaaccgagtttgagataacaatctactatcgtggcaagagggtgaag
gagcagactttgaagaacatcaatggattccgactgttttacacatcagaatctaaattc
ccgtacctggaggacctccagttcccagaagcagtctcctgtttgactgaccagcaacaa
atcatgtacacaaacgtcttgttggacgggatgggccaagggctgactgtggaagtgaac
aataatcagatctgcgcgcagagacacgggaactgtaggacattctggtcaatgacggag
aaccccagcagtaaggaacctcgacagatctccagcagggagctcactgttctctatgac
ctgccccagtttcaccaagaactgtgtgcctttctgaactctgagcgtggctctccgcag
tattcgatttggctatgttttggggagctctggccagactgtggtgatagaccctggagt
aagaagatgatcatggtgcaggtgacacctataaccttcaagctgttacatgaactggca
catggagtgggagcctcctcactgactggtgattctataaacctccagctttctgacccc
ctctcctcctccagcctcctgtccatactggaacagtgcatggatgtcgagtaa
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