Chiloscyllium punctatum (brownbanded bambooshark): 140491889
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Entry
140491889 CDS
T11285
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04010
MAPK signaling pathway
cpun04020
Calcium signaling pathway
cpun04510
Focal adhesion
cpun04540
Gap junction
cpun04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
140491889 (pdgfrb)
04020 Calcium signaling pathway
140491889 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140491889 (pdgfrb)
04540 Gap junction
140491889 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
140491889 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpun01001
]
140491889 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cpun04090
]
140491889 (pdgfrb)
Enzymes [BR:
cpun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
140491889 (pdgfrb)
Protein kinases [BR:
cpun01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
140491889 (pdgfrb)
CD molecules [BR:
cpun04090
]
Proteins
140491889 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
VEGFR-1-like_Ig-like
ig
V-set
Motif
Other DBs
NCBI-GeneID:
140491889
NCBI-ProteinID:
XP_072446425
LinkDB
All DBs
Position
20:12544071..12639908
Genome browser
AA seq
1088 aa
AA seq
DB search
MDFPKGKFPTAEIFSSRFPRSYLRTSPFRWSLFIAVYLLTFKFGECSPSHLKLKEIILQP
SSNITLNCSRNGHIHWSYEKVADVYPDGRFLHIRNATIYHNREYTCFSNKTEIMSFYIFV
PDPNMWFLPQRPDDMIIIMESSVSFNIPCLVSNPDVQVTLLHVETNTLVDLPYNNKQGFF
GKFKGGTYVCKATLNGVEQQSESYIVDTYEAPDHLYIELHAERTLVKQGEPISVTCTANT
NLLEYNWNCPRLKEAQITVSDGAQEVNSTLYLESAMLEDSGWYNCSVIGYHTLNQFEEKA
LQITVVINGFVHLNTNLSAIEYAELSEVKIFVVNITAYPEPTVKWLKDNVPFNEKSNQVT
FTKKSLGKNRYQCALHLIRVKEEDFGNYSIQVWNADSKDEFTFSLRVNVPARILELNDFH
QLNGIQTVTCVTEGLPLPEVTWYTCHDLKRCNNKVGKWNALKINSSGIQVEKRISELPGN
RVFRVESVLIRKNVDETAAMRCSATNGFGTVSRDVKLISHGIQSQLVTVATILVLLVIIV
ISLVVLVVVWRKKPRYEIRWKVIESISSDGHEYIYVDPMQLPYDSSWEFPRNQLSLGRTL
GSGAFGRVVEAMAHGLGHSNSTMKVAVKMLKTTARTSEKQALMSELKIMSHLGPHLNIVN
LMGACTKGGPIYIITEYCRHGDLVDYLYRNKHTFLQHYADKGQRESNNVITNSYNERMKS
YVALSFENDGGYMDMTKDEKLEYMPMLEAKHEPNYADIEHPDYNRPYSQETSSHTEHEVT
ENKLLISESPILTYTDLIGISYQVAQGMEFLSLKNCVHRDLAARNVLICEGKLAKICDFG
LARDIMNDSNYISRGSTFLPLKWMAPESIFNNLYTTLSDVWSYAVLLWEIFTLGGTPYPE
LPVNDQFYNAIRRGYRMPKPQYASDEIYQIMQKCWNDEFEKRPSFSTLVTHMGNQLSEGY
KKKYAQVNQDFLKGDHPAIGRAGAKFFQVNDNVIYSNCTEGLPNGTNNGYIIPLPDPEPH
EVPADTSSPIENSPSESAAGTRPSSLVCGENGEPADSSDSAPVTEDPKELEVDTEADTSV
LDVEDSFL
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggacttcccaaaaggaaagtttcccaccgccgagatcttcagcagccgcttcccacgg
tcatatttgaggacctccccctttcgatggagtctttttattgcagtgtacctgctgaca
ttcaaatttggcgaatgttctccaagtcacttgaaactgaaagagatcattctgcaaccg
tcgtccaatatcactctgaattgttccaggaatggccacattcattggagttatgagaaa
gtcgctgatgtctatcctgacggccgttttctgcacatacgtaacgcgaccatttatcac
aacagagagtacacctgcttcagtaataaaacagagataatgagcttttacatctttgtg
ccagatcctaacatgtggttcctcccacaacggccagatgacatgatcatcataatggaa
agctcagtgtcttttaacattccgtgtctggtgtccaatccagatgtccaggtcactcta
ctgcacgtggaaactaacacccttgtagacctgccatacaacaacaagcaaggctttttt
ggcaaattcaaaggtgggacctatgtgtgcaaagctacactaaatggagtggagcaacag
tctgagagttacattgtggacacatatgaagcacctgaccatctttatattgaacttcat
gctgaaagaaccctggtcaaacagggagaacccatcagtgtcacctgtactgcaaatacc
aacttgctggaatataattggaactgcccaaggttgaaggaagctcaaataactgtgtct
gacggggctcaggaagtgaactccaccctctacttggaaagcgccatgctggaagattcc
ggatggtacaactgcagtgtcatagggtaccacactctaaatcaatttgaagagaaggct
ctgcaaattaccgttgtcataaatggatttgttcatctcaacaccaatctgagtgccatt
gagtatgcagagctgtcagaggtgaaaatatttgtggttaatataactgcctatccagaa
cctactgtcaagtggctgaaagacaacgtaccattcaacgaaaagtctaatcaagtgaca
tttaccaaaaaatctctgggcaaaaacaggtatcagtgcgcactccatctcatccgtgtg
aaggaagaagactttgggaattatagcattcaagtgtggaatgctgacagcaaagatgag
tttaccttctctttaagagtaaatgtgccagctaggatcctggaactcaatgactttcac
caactgaatggtatacagactgtgacctgtgttactgagggattgcccttaccagaagtc
acctggtatacatgccatgacctgaaaaggtgcaacaataaggtggggaagtggaatgca
ctgaaaatcaactcgagtggaattcaggtggagaagcggatctctgagctaccgggaaac
cgggtcttccgtgtagagagtgtcctcatccggaagaatgtggatgaaactgctgcgatg
cgctgctccgccactaacggctttgggaccgtgagccgggatgtcaagctcatttcccat
ggtatccagtctcagctggtcactgtggccaccatcctggttttgttggtcatcattgtc
atctcattagtggttctggttgtggtttggcggaagaagcctcgctatgaaattcgctgg
aaggtcattgaatccatcagttcagatggacacgagtatatttacgttgacccaatgcaa
cttccatacgattcaagctgggagttccccaggaaccagctttctctgggtcgaacgttg
ggctctggagcctttggcagggtggttgaagcaatggcccatggactcggtcactcaaac
tccaccatgaaagttgctgtaaagatgttgaaaactactgcgaggaccagtgagaaacaa
gccctgatgtcggagctgaaaattatgagtcaccttggcccccatttaaatattgtcaat
ctaatgggagcctgtaccaaaggaggtccaatctacatcattacggagtactgtcgccat
ggcgatctggtggattatctgtacaggaacaaacataccttcctacagcactacgctgac
aaagggcagagagagtcaaacaatgtcatcacaaactcctataacgagaggatgaagagt
tatgtggccctgtcatttgagaatgatggagggtacatggacatgactaaagatgagaag
cttgagtacatgccaatgctggaggctaaacatgaaccaaactacgctgatatcgagcac
cccgactacaacaggccatactcacaggagacaagctcccacactgagcatgaggtcaca
gagaataagttactgatcagcgagtctccgattctgacctacacggatcttattggaatc
agttatcaggtggcacaaggaatggaattcctttcgttgaaaaattgtgtccatcgggat
ttggctgcaaggaatgtactaatctgtgaaggaaaactcgcaaaaatctgtgactttgga
ttagcacgagacataatgaatgattccaattatatttcaagaggcagtacctttttgcct
ctgaaatggatggcaccggagagcattttcaacaacctatacaccacactgagcgatgtc
tggtcctacgcagtcctgctctgggagatcttcaccctcggtgggacaccgtatccagag
cttcctgtcaatgaccaattctacaatgccattaggcgtggatacagaatgcccaaacct
cagtacgcctcagatgaaatatatcaaatcatgcaaaagtgttggaatgatgagtttgag
aaaagaccttcattttcaactttagtaacccacatgggaaaccagctcagtgagggttac
aagaagaaatatgcccaggttaaccaggactttctgaagggtgatcacccagccataggt
cgcgccggggctaagttcttccaagttaacgacaacgtgatctactccaactgtactgag
gggctgcccaatggcaccaataatggctacatcatcccattgccggaccctgagccccat
gaggtgcctgcagacactagcagtccgatagagaactctccgagtgagtctgctgcagga
acaaggccaagttcccttgtgtgtggggagaatggagagccggctgactccagtgattct
gctccggtgactgaagaccctaaggagcttgaggtggacactgaagctgacactagtgtg
ctggacgttgaggacagtttcctgtga
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