Coniophora puteana: CONPUDRAFT_141912
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Entry
CONPUDRAFT_141912 CDS
T03134
Name
(RefSeq) hypothetical protein
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
cput
Coniophora puteana
Pathway
cput03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CONPUDRAFT_141912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_141912
03032 DNA replication proteins [BR:
cput03032
]
CONPUDRAFT_141912
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
CONPUDRAFT_141912
mRNA cycle factors
Common to processing body (P body) and stress granule
CONPUDRAFT_141912
DNA replication proteins [BR:
cput03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
CONPUDRAFT_141912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_4
EST1_DNA_bind
RAP1
Motif
Other DBs
NCBI-GeneID:
19201676
NCBI-ProteinID:
XP_007764801
JGI:
Conpu1_141912
UniProt:
A0A5M3N2X0
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MRRHAEPELAPEANSSLHVPRNAAQRRDPSQNQRLYDHRKDDPVRFSVLARPSSNNMRQQ
AASKPSGDYVSASSTSSYAHSMASSSFTLSSGTTDNSSASSAVFDVHGKPKDDAGNNAFA
VQLKKLYRNISALESKILNEDADDHADEGRVLLQSRSRGVSEDEAEQTKWVRIISDHKQL
AELMHTLMEISLSPSVPASLRVIPTKYNIIIRLWTHGFHKVLESLRRASFSSPIALEHLQ
DFIYFAYTFYTGLLEEPALRSFRGGWLEALGDLARYRMAVAAMVNNNQIAGAALTTDAVS
QAAANTVDDTLKGPKSHTSAKSSGNRPAARIDDSPTPSVGIVAARNMVVEPEKERWRCIA
RDWFAQGLADTPGAGKLHHHLGLLSREVEAEELRAVYHFVKSMTTLHPFSTSRESILPIW
SLAAQTRRSQPDARAPELFVLLHGMLFTNIQLDDFQPTLARFLERLEIEGAEEREWIMMA
VINISSLLEYGRPSGLLRKLGASGTRDIGSSNVRVAKRPAQQDGMDVDEDGDEDMKPSPA
MSEPSVGAEAPLQLKLAMQLAFTMLSFVLKNPLRKNSQFSRPSVNSYIPVILTFLATVLK
QSDILSTLERSVPWEELANFFSSLPQNVMINQGLLAPSLGHERWAMLTSGCAPPLPEDWC
LRGMEWVGRKVFERGYWKGGEEQRAEVEILDVVEDQVVDDGVIEDDEEDGVSRKSKVSDS
TRRWTRIARCAVTISQVVDGFNWVEGTRAWKVEGALESKAQQWSVEDKREREEEERRRSR
RWVDDSMDVDDEAGLDEESEESDGGEDSEAVRELKARRQYLRSMLASSGRTGSGIRHDRV
RRNRTIKPQHNLKIVPGYTNLVLDTNILLSSLSIISSIVQSLTWTIVLPVPVIMELDGLK
SNDSQLGQAAKAALAFVTSHIHSHSTSLKVQTSKGNYLTSLVIRTEQIDFDGQDSWDRSM
DDLILKAAIWQDEHWVDRSALLKAPTHPVDPTGAVKVVLLSFDRNLRLKARSRELPAAGE
SDLAAILAMES
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggcatgcagaaccagagctagctcccgaggcgaacagcagcctgcatgtcccc
cgcaacgcagcacagaggcgggatccctcccaaaatcagcgcctttacgatcaccgcaag
gacgaccctgttcgattctcggttctcgcccgcccatcgtccaataatatgcgccagcaa
gcagcctcgaaaccctcgggcgactacgtctccgcctcctccacctcttcctatgcccac
tcgatggcctcttcgagtttcactttgtcatcaggcactaccgataattcgtcagcatcc
tccgcagtctttgacgtccatgggaaacccaaggatgacgccggcaacaatgcttttgcc
gtccaactgaagaagctgtacaggaacatatcagccttggagtcgaagatcctgaacgaa
gatgccgacgaccatgccgacgaaggacgagtgctccttcagagccgcagtcgaggtgtg
tcggaagatgaagctgagcagacgaagtgggttaggatcatatcagatcataaacaactt
gcggagctcatgcacactctgatggagatctcgctatcaccaagcgttccggcctcactg
cgggtcattcccaccaagtacaacatcatcatccgactttggacccacgggtttcacaaa
gtattggagagtctccgccgtgcttccttctcgtcacccatagctctggaacatctccag
gacttcatctactttgcttacaccttctacaccggcctcctcgaggaaccggccctccgt
tcgttccggggaggctggttagaggcactcggggatctcgcccgctaccgaatggccgtt
gcggccatggtcaacaacaatcagatcgccggcgccgcacttactaccgatgctgtctcg
caagcagcagcaaatactgttgacgatacgctcaaaggcccgaagtctcataccagtgct
aaatctagtggaaaccgccccgctgctcgcatcgatgactccccgacacccagtgtgggc
attgtcgctgcacgaaacatggtggtcgagcctgagaaggagcggtggaggtgtatcgcc
cgcgattggttcgctcagggccttgctgatacgcctggcgctggcaagctgcaccatcat
cttggtttgctgagtcgcgaggtggaggccgaagaactgcgtgccgtctatcattttgta
aagagtatgacgacactgcatcccttttcgacatcccgcgagtctatccttccaatatgg
tcgttagcggcacaaacacgtcgatcgcagccagacgctcgtgcccccgagctatttgtt
cttctacatggcatgctctttaccaacatccagctcgatgatttccaaccaacactcgct
cgcttccttgaacgcttggagatcgagggcgccgaagaacgtgaatggatcatgatggcc
gtcatcaacatcagctcgcttctcgagtatggccgcccaagtggcctgcttcggaagctt
ggtgcatccggcacccgagacatcgggtccagcaacgttcgtgtggccaaacgacccgct
cagcaggatgggatggatgtcgacgaagatggcgatgaagacatgaagccctctcctgca
atgtcggaaccctcggttggagcagaggcaccgctgcaactcaaacttgctatgcagctc
gcattcaccatgctgtcgtttgtcctcaagaacccactgcgcaagaactcgcagttctcc
cggccttccgtcaactcctatatccctgttattctcaccttccttgccacagtcttgaaa
cagtccgacatcctatcgaccttggagcgatccgtgccttgggaagaacttgcgaatttc
ttctcttctctccctcaaaacgtgatgatcaaccagggtttgctcgccccaagtcttggt
cacgaacgatgggccatgctcacgagtggatgcgcgcctccacttccagaggactggtgc
ctacgcggcatggaatgggttggccggaaggtcttcgagcgaggctattggaagggcggt
gaggagcaacgtgcagaggtggagattttggatgtggtggaggatcaggtagtcgatgat
ggcgtgattgaagacgacgaggaagacggtgtctcacggaagtccaaggttagcgacagc
actcgccgctggacacgtattgcacggtgcgctgtcaccatttcgcaagtcgtcgacggc
ttcaactgggtcgaggggacgagggcatggaaagtcgaaggcgctctcgaatccaaggct
cagcagtggtcagtggaggacaagcgcgagcgtgaggaagaagaacgtcgccgttcgcgc
agatgggttgacgattcgatggatgtcgatgacgaggcaggtctcgacgaggagtcggaa
gagagtgatggcggcgaggattctgaggctgttagagagctcaaggcgcgccgacaatat
ttgcgctcgatgttggcctcgtctggacggacaggttctggcattcgccacgaccgcgtt
cgtagaaaccgcaccatcaagcctcaacacaacctcaagattgttccaggctacactaat
ctcgtcctcgacaccaacatccttctctcgtcgctctccattatttcatcgattgtccaa
agtctcacttggactatcgttcttccggtgccggtgattatggaactcgatgggctcaag
tccaatgattctcagctcgggcaagctgccaaagccgcgcttgccttcgtcacatcacac
atacactcgcactcgacatcattgaaggtgcagacctcgaaaggcaactacctcacctcc
ctcgtcatccgcactgagcaaatcgactttgacggtcaagattcctgggatcgttccatg
gatgacttgatccttaaggcggctatctggcaagacgagcactgggttgacaggtccgca
cttctcaaggcacccacccaccccgtggatcctaccggtgccgtcaaggtcgttcttctt
agctttgacaggaaccttcgtctcaaagctcggtcacgagagctccccgccgcaggcgag
agcgatcttgcggccatcctggccatggagtcgtga
DBGET
integrated database retrieval system
