Cryptosporidium parvum: cgd4_140
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Entry
cgd4_140 CDS
T00168
Name
(RefSeq) Swi2/Snf2 ATpase,Rad16 ortholog
KO
K15083
DNA repair protein RAD16
Organism
cpv
Cryptosporidium parvum
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpv03400
]
cgd4_140
DNA repair and recombination proteins [BR:
cpv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
cgd4_140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_11
ResIII
zf-PARP
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-HC5HC2H
zf-ANAPC11
zf-C2HC_2
DUF7410
zf_RING_Vps8_fungal
TRAF6_Z2
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
3372722
NCBI-ProteinID:
XP_625623
ApiDB_CryptoDB:
cgd4_140
UniProt:
Q5CQM5
LinkDB
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Position
4:complement(33247..37083)
Genome browser
AA seq
1278 aa
AA seq
DB search
MADPDLGEMLSSRKPIVLLNNAYWEPKVKEWVPNLKIDELDEDQKSIIEQKLFVAVLTPS
NISRCAVCGKTITKGTYRLGVPEYDRRGMYGIINRWNHINPCSQKYLKKAIQGHEFNLDE
IERRISEVTYGWSCLPIGIRDEFLDLCTKEIITNPNEFTIENSDDLISRSIVEVKPTPIK
LTYELLQFQKEGLAWLCNQEKSTARGGILADEMGMGKTIQTISLILEHDIPPVTNKAEKG
EVIGKNLVIAPVAAVLQWKQEIERFTKPGSLKVHIYHGSKRNKNQGNKGTKQDYGGVDID
DADVVITTYPTLEAEYRKIASAFKSKCPYCDRSFLKRTLKIHLRYFCGPNSMRTAKQALT
ERKNEGLKKAMRTLKIGLEEGVDKAKQLEDIARSLPTISNVYREILAKADLLDDESLSSA
LPWFTSRRKSQQLVKKEDSSNSLKENDTEEKIQKTEIVKDEPEENLLSLLEWGGIKLPLK
SETVKSIKEFLSSIENSKEYLSTRFNIDGQILDSLVELYDNCKSLRKAELVDKLSNILGL
DNPDNNSNEGNHLNQNTKKTSKSTHNSNKKANTKSNNSKNSRKKKKYEDEFEDDYNAEEE
SIDEYSEYDESDDSQDLNIKRRKNAKNQKKKQNDDDDDDEYKVVEEIDEIDDEEDDNEED
EIIQKLREYSAIFGRSWNRIILDEAHRIKARTTSTAKAIFALKSRGTKWCLTGTPLQNRV
GELYSLVRFIGFHPYAYNFCNKVDCDCRQLNYVTHLKYCSFCGHARSCHYSYFNKLIINP
IKRYGFSGEGSEALRRLKKEVLDKVLLRRTKVQRQEDVRLPPLEIKVINNELSAPEKDFY
TSLYQRSKVQFDTYVNQGTVLHNYAHVFDLISRLRQAVDHPYLIVYGKFNHKKDLEYKKE
YKEEDNDEEKDVECLNDAEEEKTNFDSKKVIPSKSRADSNEDLCYICMDNVTIDQRVTSK
CKHGFHIKCIKEYIEQAPQEDEIITDFDTEGEQTMRGVLGCPVCYVPLTIDFNKVSNLNK
KNKKIKSGYDEMNDEENDTNDNMESEQMQEQIERELERMEMAKQLGIDVSKENLKQEPKQ
ENEDILSCVRNKFITRQIKTQGFESSTKIDTLLEEVNKMMQEDPESKGIVFSQFTNMLDL
VSYRLKKANIGCVMLAGSMSILQRNSILYSFNKFPDLKIILISLKAGGEGLNLQVANYVF
LLDPWWNPAVELQAFQRAHRIGQKKKVTALRFITKDTIEERMFQLQEKKQLVFDGTVGAS
NNALNKLNSDDLKFLFQN
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctgacttgggagaaatgcttagtagcagaaaacctattgtacttttaaat
aatgcatactgggagccaaaagttaaagaatgggtaccaaatttaaaaatagatgaattg
gatgaagatcagaagagtattatagaacaaaaattatttgttgctgttttgactccgagt
aatatatctagatgtgcagtatgtggaaaaacaataacaaaaggtacttatagactaggt
gtgcctgaatatgatagaagaggaatgtatgggataataaatagatggaaccacattaat
ccttgctcgcaaaagtatcttaaaaaagcaattcaaggccatgaatttaacttagatgaa
attgagaggagaatttcagaagttacctatggttggagttgtttacctattggaataagg
gacgaatttcttgatttgtgcacaaaagaaatcataacaaatcctaatgaattcaccatt
gaaaactcagatgacctaattagccgttcaattgtagaagtaaaacctacccccataaaa
cttacatatgaattattacaatttcaaaaagaaggtttagcatggctttgtaatcaggaa
aaatcaactgcaagaggaggtattttagctgatgaaatgggtatgggaaagaccattcag
acaatatcattaattctagaacatgatattccacctgttacaaataaagcagaaaaagga
gaagttattggaaaaaatttggtaattgctcctgtcgcagcagtgctacaatggaaacag
gaaattgaaagatttacaaaacctggttcattaaaagtacacatttaccatggttcaaaa
agaaataagaaccaaggaaataaaggtactaaacaagattatggtggagttgacattgat
gatgctgacgtagtaattaccacctaccctacattggaagctgaatatagaaagattgca
tcagcattcaaatctaaatgtccttactgtgatagatcattcttaaaaaggactttgaag
attcaccttagatacttttgtggtccaaactccatgagaacagctaaacaagcacttact
gaaagaaaaaatgaaggtttaaaaaaagctatgagaactttaaagattggattagaggaa
ggtgttgataaggcaaaacagttggaagatattgctcgtagtttaccaacaattagcaat
gtttatagagaaatacttgctaaagcagacttacttgacgatgaatcattgtcttcagcc
ttgccttggtttacttccagaagaaaaagtcaacaattagttaaaaaggaagactctagt
aattcgttaaaggaaaacgatactgaagaaaaaattcaaaagactgaaattgtaaaggat
gaacctgaagaaaatttactttctttattggaatggggaggaattaaactgcctttaaaa
tcagagacagtaaaatctataaaggaattcctttcaagtattgaaaatagcaaggagtat
ttatctactagattcaatattgatggacaaatattggattccttggttgaattatatgat
aactgtaaatctcttcgaaaggctgaactcgtggataaactgtcaaatatattgggactt
gataaccctgacaataattctaatgaagggaatcatttgaatcaaaatactaaaaaaact
tcaaagtctactcataatagcaataaaaaagcaaatacgaagagtaataattctaagaat
agtagaaaaaagaagaagtacgaagatgaattcgaggacgattataatgccgaagaagaa
tcaattgatgaatattccgaatatgacgaatctgatgactcccaagacttgaatataaaa
cgtagaaaaaatgctaagaaccaaaaaaaaaagcagaatgatgatgatgatgacgatgaa
tataaagtagtagaagaaattgatgaaattgatgatgaagaagatgataatgaagaggat
gaaattatccaaaagttaagagaatattcagcgatttttggaagaagctggaatcgcatt
attttggatgaagcgcacagaattaaggcaagaacaacttctactgcaaaggcaattttt
gctttaaagtctagaggaacaaaatggtgtcttacaggtacccctcttcaaaatagggtt
ggcgaactctactctcttgttagatttattggatttcatccctatgcttataacttttgc
aataaggtagattgcgattgtaggcaattaaactatgttacacatttaaaatattgttcg
ttttgtggtcatgcaagatcatgtcattattcatattttaacaaattaattattaatcca
atcaaaagatatggtttctctggagaaggctctgaagccttaagaaggcttaaaaaggag
gtattagataaagttttactaagaagaacaaaagttcaacgacaagaagacgttaggctt
ccaccattagaaattaaagttataaataatgagctttctgccccagaaaaagatttctat
acttctttatatcaaagatctaaagttcagtttgatacttatgttaatcaaggaacagtt
ttgcacaattatgctcacgtctttgatttgattagtcgtcttagacaagctgtagatcat
ccatatctaattgtttatggaaaattcaaccacaaaaaagatctagaatataaaaaagaa
tacaaagaagaagataatgatgaagaaaaggatgttgaatgtttaaacgatgcagaagaa
gaaaaaacaaattttgactcaaaaaaagttataccgtcaaaaagcagagctgacagtaat
gaagacttatgttatatttgcatggataatgttacaattgatcaaagagttacaagtaaa
tgcaaacatggattccatattaaatgtatcaaagaatacattgaacaagctccccaggaa
gacgaaataattactgattttgatacagaaggtgaacaaacaatgagaggagttcttgga
tgccctgtttgctatgtacctcttacaattgattttaataaagtttcgaatttaaataag
aaaaataaaaagattaaatccggatatgatgaaatgaatgacgaagaaaatgatacaaat
gacaatatggagtctgaacaaatgcaagagcaaattgaaagagagcttgaaagaatggaa
atggctaaacaattaggtatagatgttagcaaagaaaatcttaaacaagaaccaaagcaa
gaaaatgaagacattctttcttgtgttagaaataaatttattactcgacaaattaaaact
caagggttcgaaagctctacaaaaattgatacactattagaagaagttaataaaatgatg
caagaagatcctgaatcaaagggaatcgtattttctcaattcacaaatatgcttgacttg
gtttcctatcgcttaaaaaaggcaaatattggatgcgtaatgcttgctggctcaatgtca
attcttcaaagaaatagcatattgtattcatttaataaattcccggaccttaaaataatc
ttaatcagcctcaaagctggcggtgaaggtcttaacttacaggttgctaattacgttttt
ctacttgatccttggtggaatcctgcagttgaattacaagcattccaaagagctcatcga
atcggtcagaagaaaaaagttactgcattaaggtttattacaaaggatacgattgaagaa
agaatgtttcaactacaagaaaagaaacaacttgtttttgacggtaccgttggagcatct
aataatgctctaaataaacttaattctgatgatcttaaatttttattccaaaattaa
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