KEGG   Cryptosporidium parvum: cgd7_690
Entry
cgd7_690          CDS       T00168                                 
Name
(RefSeq) small nuclear ribonucleoprotein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03018  RNA degradation
cpv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    cgd7_690
  09123 Folding, sorting and degradation
   03018 RNA degradation
    cgd7_690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpv03019]
    cgd7_690
   03041 Spliceosome [BR:cpv03041]
    cgd7_690
Messenger RNA biogenesis [BR:cpv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     cgd7_690
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     cgd7_690
Spliceosome [BR:cpv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    cgd7_690
 Complex C
  U2 snRNP components
    cgd7_690
SSDB
Motif
Pfam: LSM YLDV-IL18BP-like Hpr_kinase_N LSM12_LSM
Other DBs
NCBI-GeneID: 3371771
NCBI-ProteinID: XP_628259
ApiDB_CryptoDB: cgd7_690
UniProt: Q5CYX1
LinkDB
Position
7:<159466..>159753
AA seq 95 aa
LLNFLEPLDLIRLSLDEQVFVKCRGNRELKGTLYAYDPHMNMVLGNVEETYYEEESKSDT
QNSEKKLKKRRIEMLFLRGDLIILVKPAVKLGKST
NT seq 288 nt   +upstreamnt  +downstreamnt
ttattaaactttttagaaccactggatctcattagactaagcttagatgagcaagtgttt
gtaaaatgtagaggaaatagagaattaaaaggaactctttatgcttatgatccccacatg
aatatggttttgggtaatgttgaggaaacctactatgaagaggaatccaaatcagacact
cagaattctgagaagaagcttaaaaagagaaggatagagatgttatttttaagaggagat
ttaatcatcttggtcaagccagcagtaaagcttggaaaatctacctag

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