Coccidioides posadasii: 9696668
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Entry
9696668 CDS
T01332
Symbol
CAF16, D8B26_000773
Name
(RefSeq) CCR4-NOT regulatory complex component
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cpw
Coccidioides posadasii
Pathway
cpw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
9696668 (CAF16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpw03019
]
9696668 (CAF16)
Messenger RNA biogenesis [BR:
cpw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
9696668 (CAF16)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
AAA_15
AAA_23
RsgA_GTPase
AAA_28
MMR_HSR1
AAA_22
AAA_16
ORC-CDC6-like
PduV-EutP
FtsK_SpoIIIE
DUF3584
Roc
AAA_13
Motif
Other DBs
NCBI-GeneID:
9696668
NCBI-ProteinID:
XP_003071173
UniProt:
C5P2C5
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Position
1:join(2774985..2775114,2775188..2775870)
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AA seq
270 aa
AA seq
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MASATPDSSVHVHDLNYSFPDGTAGLTNINLDLPLGSRTLLIGANGAGKSTLLRLLSGKR
LAPANTVTIGGVDPFKEGLEGVTYLGVEWVLNPIVRTDIDVPTLLASVGGDHYPERRDEL
VEILDVDLSWHMHAVSDGERRRVQLAMGLLRPWNLLLLDEITVDLDLLSRANFLAFLRRE
TEIRPCTILYATHILDNLANWPTHLVHMHMGQVRDWGAIEKFYAGKPRVSENSQLGELVL
EWLKRDLKERGPRPGRPSESKVEPGYNMEI
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagccactccggattcatccgttcacgttcacgacctcaactacagctttccc
gacggcacagctggtcttacaaacatcaatcttgacctccctctgggaagccgtaccttg
ctaattggagcgaatggtgcgggtaaaagcactctcctccgtctcctctcaggaaaacgc
ctggctccagctaataccgtaactatcggtggtgtcgatccttttaaggaggggcttgaa
ggcgtcacatatctcggggtggaatgggtcctgaaccccatcgtccgcacagacattgat
gttcccaccctcctcgcatccgttggaggcgaccactaccctgaacgtcgcgatgaattg
gtcgagattctcgacgtagatctatcatggcatatgcacgctgtttctgacggtgagcgg
cgccgtgttcagctcgccatgggtctactgcggccatggaatctgctcctgctggatgaa
attactgttgatctagatctactcagtcgggcaaatttcctggcatttttgcgaagagag
acggaaatccgaccgtgcactatcttgtatgccactcacatcttggataaccttgcaaat
tggcccactcatcttgtgcacatgcatatgggccaagtacgagactggggtgcgattgaa
aagttttacgccggaaaaccaagagtgtctgagaatagtcaacttggtgagttggttcta
gaatggctgaagagggatttaaaagaaagagggccgcgacccggaaggccgagtgagagt
aaagtggaaccaggatataacatggaaatatag
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