Cherax quadricarinatus (Australian red claw crayfish): 128686024
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Entry
128686024 CDS
T09502
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd04120
Ubiquitin mediated proteolysis
cqd04140
Autophagy - animal
cqd04144
Endocytosis
cqd04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128686024
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128686024
04140 Autophagy - animal
128686024
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128686024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqd04131
]
128686024
04121 Ubiquitin system [BR:
cqd04121
]
128686024
Enzymes [BR:
cqd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128686024
Membrane trafficking [BR:
cqd04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128686024
Ubiquitin system [BR:
cqd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128686024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
Sina_ZnF
zf-RING_5
RING_XB3-XBAT31
Zn_ribbon_ACC
zf-TRAF_2
zf-rbx1
zf-RING_11
zf-RING_6
CEP104_ZnF
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128686024
NCBI-ProteinID:
XP_069940483
LinkDB
All DBs
Position
1:complement(94205265..94308912)
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AA seq
576 aa
AA seq
DB search
MMECGETDSMTIISRQEGYDYEFVPPLDSKYECAICLLGLRSPVQTTCGHRFCKECIFNS
ISESSNRCPIDNTPLTETDLFPDSCAEREILQLRVKCPNHTLGCTRIIDLMYIEHHTQAC
SFQPVMCPNECSATVLQKELEQHLMSECVLRVKMCDLCNEPFTFNQEQLHLLTCRHVVVA
CEMCGTMVERGDVATHMTETCQKVVVTCPFAEHGCHQKMTRADLDQHMAQETQFHLFLLS
SAYKKINTFVSELSRTVGVIQSPFGNFSRQPSLRSQLSATSPIPENHVSPSHPERTLEKS
LSASGAIGGSEKSSLFSSAHPGDRGADSGIEVNKLHLHMNHMTINEGAKATSKSSMSVLT
QQDIILRDLCEKSVDLSQSMVEETIKLSNLAKRIEEIDAYVEAHLAELNGKFCNGEYVWR
IRNFSQFCAELQNKPGRVCHSPPFYTSQFGYKFCLRTNITSKFDEHFLALFIHTMQGDND
DFLDWPFSGRITISVLDCGTALPKKHITETMMSKPDRQAFMRPEVSRNPKGFGYTDFVPL
KKLIDDKNGSYIKNNMLCIRAVICPGTPSIKQIECT
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtgtggagagactgattccatgaccatcatttctagacaggagggttatgac
tatgagtttgtacctccccttgattccaagtatgagtgtgccatatgtctgctgggactc
aggtctccagtacagaccacttgtggacatcgcttttgtaaagaatgtatcttcaacagc
attagtgagagcagcaatcgttgcccaattgataacacacccttaacagaaacagacttg
tttcccgactcttgtgctgagcgggagatcctgcagctcagagtaaaatgtccaaatcac
acccttggatgcacacgcataatagatcttatgtatattgagcaccatactcaggcatgc
tcctttcagccagttatgtgtcctaatgagtgttcagctacagtgcttcagaaagaacta
gagcagcacttgatgtccgagtgtgtcttacgggtgaaaatgtgtgatctctgtaacgaa
ccctttactttcaaccaagagcagcttcatctgttaacttgccgccatgttgtagttgca
tgcgagatgtgtgggacgatggtggaacgtggcgatgttgctacccacatgactgaaact
tgtcagaaggtggtagtcacttgcccctttgcagagcatgggtgccatcaaaagatgaca
cgagctgacttagaccaacacatggcacaagaaacacaattccacctctttctgttatca
tctgcttacaaaaagatcaacacatttgtatccgaattaagtcgaacagttggggttata
cagtccccatttggaaactttagtcgacagccaagtttaagaagtcaactgtcagccact
tctccaatacctgagaaccatgtaagtccatcacatcctgagagaacattagaaaaatcc
ttgtctgcttctggagccattgggggcagcgagaagtcatcattattttcttcagctcat
cctggagatagaggagcagattcaggaattgaagttaataaacttcacctgcatatgaat
catatgacaattaatgaaggtgccaaagcaacttcaaagtcttccatgtcagtactgacc
caacaagatataatactgcgtgacttgtgtgaaaagagtgtagatttaagccagagtatg
gtagaggagaccattaagcttagcaatttggccaagaggattgaagaaattgatgcttac
gttgaagctcacttagcagagctaaatggaaaattttgtaatggtgaatatgtatggaga
ataaggaatttctcacagttttgtgctgagttacaaaataagcctgggagagtgtgccac
agtccaccattctacacatctcaatttgggtataaattttgcttgcggacaaacattaca
agtaagtttgatgagcatttcttagcactatttattcacacaatgcagggggataatgat
gattttctagactggccattttctggacgaataacgatctctgttttagattgtggcaca
gctttacccaagaagcacatcacagaaacaatgatgagcaaaccagatcgacaagctttc
atgcggccagaggtatctcggaatcctaaaggatttggctacactgactttgtacccctt
aaaaaactaattgatgataagaatgggagctacataaaaaataatatgttgtgcattcgt
gcagtgatttgtccaggaacaccatccattaaacaaatagaatgcacttga
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