Cherax quadricarinatus (Australian red claw crayfish): 128686024
Help
Entry
128686024 CDS
T09502
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd04120
Ubiquitin mediated proteolysis
cqd04140
Autophagy - animal
cqd04144
Endocytosis
cqd04517
IgSF CAM signaling
cqd04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128686024
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128686024
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128686024
04140 Autophagy - animal
128686024
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128686024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqd04131
]
128686024
04121 Ubiquitin system [BR:
cqd04121
]
128686024
Enzymes [BR:
cqd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128686024
Membrane trafficking [BR:
cqd04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128686024
Ubiquitin system [BR:
cqd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128686024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
Sina_ZnF
zf-RING_5
RING_XB3-XBAT31
zf-TRAF_2
zf-rbx1
zf-RING_11
zf-RING_6
CEP104_ZnF
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128686024
NCBI-ProteinID:
XP_069940483
LinkDB
All DBs
Position
1:complement(94205265..94308912)
Genome browser
AA seq
576 aa
AA seq
DB search
MMECGETDSMTIISRQEGYDYEFVPPLDSKYECAICLLGLRSPVQTTCGHRFCKECIFNS
ISESSNRCPIDNTPLTETDLFPDSCAEREILQLRVKCPNHTLGCTRIIDLMYIEHHTQAC
SFQPVMCPNECSATVLQKELEQHLMSECVLRVKMCDLCNEPFTFNQEQLHLLTCRHVVVA
CEMCGTMVERGDVATHMTETCQKVVVTCPFAEHGCHQKMTRADLDQHMAQETQFHLFLLS
SAYKKINTFVSELSRTVGVIQSPFGNFSRQPSLRSQLSATSPIPENHVSPSHPERTLEKS
LSASGAIGGSEKSSLFSSAHPGDRGADSGIEVNKLHLHMNHMTINEGAKATSKSSMSVLT
QQDIILRDLCEKSVDLSQSMVEETIKLSNLAKRIEEIDAYVEAHLAELNGKFCNGEYVWR
IRNFSQFCAELQNKPGRVCHSPPFYTSQFGYKFCLRTNITSKFDEHFLALFIHTMQGDND
DFLDWPFSGRITISVLDCGTALPKKHITETMMSKPDRQAFMRPEVSRNPKGFGYTDFVPL
KKLIDDKNGSYIKNNMLCIRAVICPGTPSIKQIECT
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtgtggagagactgattccatgaccatcatttctagacaggagggttatgac
tatgagtttgtacctccccttgattccaagtatgagtgtgccatatgtctgctgggactc
aggtctccagtacagaccacttgtggacatcgcttttgtaaagaatgtatcttcaacagc
attagtgagagcagcaatcgttgcccaattgataacacacccttaacagaaacagacttg
tttcccgactcttgtgctgagcgggagatcctgcagctcagagtaaaatgtccaaatcac
acccttggatgcacacgcataatagatcttatgtatattgagcaccatactcaggcatgc
tcctttcagccagttatgtgtcctaatgagtgttcagctacagtgcttcagaaagaacta
gagcagcacttgatgtccgagtgtgtcttacgggtgaaaatgtgtgatctctgtaacgaa
ccctttactttcaaccaagagcagcttcatctgttaacttgccgccatgttgtagttgca
tgcgagatgtgtgggacgatggtggaacgtggcgatgttgctacccacatgactgaaact
tgtcagaaggtggtagtcacttgcccctttgcagagcatgggtgccatcaaaagatgaca
cgagctgacttagaccaacacatggcacaagaaacacaattccacctctttctgttatca
tctgcttacaaaaagatcaacacatttgtatccgaattaagtcgaacagttggggttata
cagtccccatttggaaactttagtcgacagccaagtttaagaagtcaactgtcagccact
tctccaatacctgagaaccatgtaagtccatcacatcctgagagaacattagaaaaatcc
ttgtctgcttctggagccattgggggcagcgagaagtcatcattattttcttcagctcat
cctggagatagaggagcagattcaggaattgaagttaataaacttcacctgcatatgaat
catatgacaattaatgaaggtgccaaagcaacttcaaagtcttccatgtcagtactgacc
caacaagatataatactgcgtgacttgtgtgaaaagagtgtagatttaagccagagtatg
gtagaggagaccattaagcttagcaatttggccaagaggattgaagaaattgatgcttac
gttgaagctcacttagcagagctaaatggaaaattttgtaatggtgaatatgtatggaga
ataaggaatttctcacagttttgtgctgagttacaaaataagcctgggagagtgtgccac
agtccaccattctacacatctcaatttgggtataaattttgcttgcggacaaacattaca
agtaagtttgatgagcatttcttagcactatttattcacacaatgcagggggataatgat
gattttctagactggccattttctggacgaataacgatctctgttttagattgtggcaca
gctttacccaagaagcacatcacagaaacaatgatgagcaaaccagatcgacaagctttc
atgcggccagaggtatctcggaatcctaaaggatttggctacactgactttgtacccctt
aaaaaactaattgatgataagaatgggagctacataaaaaataatatgttgtgcattcgt
gcagtgatttgtccaggaacaccatccattaaacaaatagaatgcacttga
DBGET
integrated database retrieval system
