KEGG   Cherax quadricarinatus (Australian red claw crayfish): 128691684
Entry
128691684         CDS       T09502                                 
Symbol
Roc1a
Name
(RefSeq) RING-box protein 1A
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cqd  Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03420  Nucleotide excision repair
cqd04120  Ubiquitin mediated proteolysis
cqd04141  Protein processing in endoplasmic reticulum
cqd04310  Wnt signaling pathway
cqd04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cqd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    128691684 (Roc1a)
   04120 Ubiquitin mediated proteolysis
    128691684 (Roc1a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    128691684 (Roc1a)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    128691684 (Roc1a)
   04350 TGF-beta signaling pathway
    128691684 (Roc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cqd04121]
    128691684 (Roc1a)
   03400 DNA repair and recombination proteins [BR:cqd03400]
    128691684 (Roc1a)
Enzymes [BR:cqd01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     128691684 (Roc1a)
Ubiquitin system [BR:cqd04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   128691684 (Roc1a)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     128691684 (Roc1a)
   Cul2 complex
     128691684 (Roc1a)
   Cul3 complex
     128691684 (Roc1a)
   Cul4 complex
     128691684 (Roc1a)
   Cul7 complex
     128691684 (Roc1a)
   Cul8 complex
     128691684 (Roc1a)
   Cul9 complex
     128691684 (Roc1a)
DNA repair and recombination proteins [BR:cqd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      128691684 (Roc1a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      128691684 (Roc1a)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX DUF8003
Other DBs
NCBI-GeneID: 128691684
NCBI-ProteinID: XP_053636519
LinkDB
Position
26:complement(1925494..1942544)
AA seq 114 aa
MSAMEVDPQEEEVEVPSSSTSKQDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCI
ECQANQASVTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 345 nt   +upstreamnt  +downstreamnt
atgtcagcgatggaggtggatccacaggaggaagaagtggaggtgccttcttcaagcacc
tccaaacaagacaagaagaggtttgaggtcaagaagtggaatgcagtagcactctgggca
tgggatattgttgttgataactgtgccatctgccgcaatcacattatggatttgtgcata
gaatgtcaagccaaccaggcctcggttacatcagaagaatgcactgtagcttggggcgtg
tgtaatcatgctttccacttccattgtatatctcgatggttgaaaacccgtcaagtatgc
ccattagacaacagggaatgggagttccagaagtatggtcattag

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