Cherax quadricarinatus (Australian red claw crayfish): 128697169
Help
Entry
128697169 CDS
T09502
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128697169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqd03041
]
128697169
Spliceosome [BR:
cqd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
128697169
Complex C
U5 SnRNP specific factors
128697169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Motif
Other DBs
NCBI-GeneID:
128697169
NCBI-ProteinID:
XP_053644663
LinkDB
All DBs
Position
89:complement(3362436..3398139)
Genome browser
AA seq
974 aa
AA seq
DB search
MDVDLYDEFGNYIGPELDSDEEEEDDDEDYADQDQDVNGFDDDDGAGGEEEEVSAQAVVL
HEDKQYYPSAADVYGPEVETIVQEEDAQPLTQPIIQPVKIKKFSHVEKDLPVTCYNLEFL
ADLMDNPNLVRNISLVGHLHHGKSTFVDCLIHQTHPEFRSKEDVPVRYTDTLFTEGERGL
SIKATPITLVMQDVRNKSFLMNIFDTPGHVNFSDEVTAAMRLSDGVVVFVDAAEGVMLNT
QRLLKHAVQERLAITVCINKVDRLILELKLPPQDAYYKLRHIVEEVNSLLQQYTDQENPQ
TISPLLGNVCFASSQYSLCFTLKSFAKTYCQHYGYELPLEDFARRLWGDIYFNPRTRKFT
KKPPTSTAQRSFVEFILEPLYKIFAHIVGDVDTHLLSLMEELGIHMSKEEQKMNIRPLLK
LFMTKFIGDFEGFVDMCVQHIPSPKAYGKQKVETTYTGPLDAQLAESMMVCDPEGPLVVH
TTKQYPNQDATAFHVFGRVLSGTIHANQDVRVLGEKYTLMDEEDSRILTVGRLWVSEGRY
NIEVNAVPAGNWVLIEGIDEPIVKTATITDLPPSSELHIFRPLKFNTQSVIKIAVEPVNP
SELPKMLDGLRKVNKSYPLLSNKVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVSFCETVVDTSSLKCFAETPNKRNKITMIAEPLERGLAEDIEGEVVQINWDRRRLGEF
FQTRYDWDVLAARSIWAFGPNQSGPNILVDDTLPSEVDKNLLSSVRDSIVQGFQWGTREG
PLCEEPIRNCKFKILDAVIAEEPLHRGGGQVIPTARRVAYSAFLMATPRLMEPYYFVEIQ
APADCVSSVYTVLTKRRGHVTQDAPVAGSPLYTIKAFIPAIDSFGFETDLRMHTQGQAFC
LSVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPM
LLELARQDVTLNYA
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgatctctatgatgagtttggcaactacattgggccagaacttgactcagat
gaggaggaggaggatgacgatgaggattatgcagaccaggaccaggacgtgaacggtttt
gatgacgatgatggtgcaggaggagaggaagaggaagtctcagctcaggcggtggtgctg
catgaagacaagcaatattaccccagtgctgccgatgtttatggtcctgaggttgagacc
atcgtacaggaggaagatgctcaacctctgacgcagcccatcattcagccagtaaagatt
aaaaagttcagtcatgtagagaaggacttacccgtcacttgctacaacctagagtttctt
gccgatctgatggacaatccaaacctggttcgaaatatatcacttgtgggtcatcttcat
catggcaagagcacctttgttgactgtctaattcaccagacacatccagaattcaggagc
aaggaggatgttcctgttcgatacactgacacactgtttactgaaggcgaacgagggctt
agcatcaaggctactccaatcactctagtgatgcaggatgttcgcaacaagagctttctt
atgaacatctttgacacaccaggacatgtaaacttctctgatgaagtgacagctgctatg
aggttaagtgatggtgttgtggtgttcgtagatgctgctgaaggtgtgatgctcaacaca
cagcgactcttgaaacatgctgtacaagaaaggctagccatcaccgtgtgcatcaacaaa
gtggatcgcctcatactggaactaaagttgcctcctcaggatgcatactataaactgaga
cacatagttgaagaagttaactctcttctccagcagtatacagaccaggagaatccacaa
accatctcccctttgctaggcaatgtttgctttgccagctctcagtattctctctgtttt
actctgaaatcctttgctaaaacatattgccagcattatggctatgagctgcctctggag
gattttgcaaggcgtctgtggggtgacatatatttcaatcctcgtactaggaagtttaca
aagaagcctcccacttcaacggctcagaggagctttgtagaatttatccttgagcctctt
tataaaatctttgcacacattgttggagatgtagatactcatttgttatctttaatggaa
gagttgggtatccacatgagcaaggaagagcagaagatgaatatcagaccattgctgaaa
cttttcatgactaaattcattggtgattttgaagggttcgtagatatgtgtgttcagcac
ataccttcacccaaagcatatggaaagcagaaggtggagacaacttacactggcccgctg
gatgcacagctggcagagagcatgatggtgtgcgacccggagggtcccctcgttgttcac
actaccaagcagtatcccaatcaagatgcaactgcttttcacgtatttggacgtgttctt
tcaggaaccattcatgctaaccaagacgttcgtgtgttgggtgaaaagtatacgctcatg
gacgaggaagattcccgtatattgactgttggaaggttgtgggtgtccgaaggccgatac
aacatagaggtgaatgctgttcctgctggcaactgggtcttgattgagggaattgatgaa
cccattgtgaagactgctaccatcacagatcttccacccagtagtgaactgcatattttc
cgaccacttaagtttaacacccagtctgtcataaagattgcagttgaaccagtaaatcct
tcagagctgcccaagatgttagacggtcttcgtaaagttaacaaatcatacccactgttg
agtaataaggtagaggaatctggagagcatattattcttggaacaggagaattatacctg
gattgtgtcatgcatgatctgaggaagatgtactcagagattgacattaaggtggctgac
cctgtggtcagtttttgtgagactgtcgttgatacgtcctcactaaaatgttttgcagaa
actccaaacaagagaaataagatcaccatgattgccgaaccattagaaaggggtttagct
gaagatattgaaggagaagttgtacaaataaattgggaccgtagacgactgggagagttt
ttccagacacgctatgattgggatgtgttggctgctcggtcaatttgggcttttggtccc
aatcagagtgggccaaatattttggtagatgacacactgccctcagaagtagacaagaat
ttattgtcatctgtaagagattctattgtgcaaggtttccagtggggtacaagagaaggt
cctctctgtgaagaacccattcgaaattgtaagttcaagattcttgatgcagtcatagcc
gaggagcctttgcatcgaggtggtggtcaagttattccaacagccaggagggtggcatac
tcagcgttcttgatggcaacgcctcgactcatggaaccttactattttgtggaaatccag
gctccagcagattgtgtatcatcagtatatacggtgttaacaaagcgtcgtggccacgta
acccaggatgcccctgtagctggttccccactctatactattaaagccttcattccagcc
attgattcctttgggtttgagacagatttgcgtatgcatacacagggtcaggccttctgt
ttgagtgtgttccatcattggcagattgtgccaggtgatcctctagataagagcattgtg
attcgccccttagagccccagccagccactcatctggcccgtgagttcatgatcaagact
cgacggagaaaaggcttgtcagaggatgtatctattaataagttcttcgatgatcctatg
ttgctggaacttgccagacaagatgtgacactcaactatgcttaa
DBGET
integrated database retrieval system
