Chenopodium quinoa (quinoa): 110701207
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Entry
110701207 CDS
T05764
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110701207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110701207
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110701207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_23
AAA_15
AAA
AAA_29
Arf
Zeta_toxin
AAA_28
AAA_22
AAA_30
nSTAND3
TsaE
SRP54
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
110701207
NCBI-ProteinID:
XP_021734498
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MADPQSPMVEINGLEFTYPGIDGHPPPGSTPLIQDFSLSLFPGDRCLLVGANGAGKTTIL
KILGGKLMVEPHMVRVLGRSAFHDTNLTSSGDMCYLGGEWKRDVAFAGFEVSIQIDVSAE
KMIFGVGGVDPARRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITV
DLDVLGRADLLKFLIKECEERGAIVIYATHIFDGLENWPTHIVYVARGKLQLSLPMEKVK
EMSNLSLMRTVESWLRKERDEERKRRKERKANGLPEFEKRIEGTCVVGDPAHAAARVTNN
GWAAGRLHSTLAGEDNFTFSSNRVLRQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccacaatctccaatggttgaaatcaacggcttagaattcacctaccctgga
atcgacggtcaccctcctcccgggtccacccctttaatccaggatttctctttatccctt
tttcccggtgatcgttgtcttctcgtcggtgctaatggcgcagggaagacgacaattctg
aagatattaggagggaagcttatggttgagcctcatatggttagggttcttgggcgatct
gcttttcatgatactaatttgacttcttctggtgatatgtgttatcttggtggagagtgg
aagcgagatgttgcttttgctggatttgaggtttctatacagatagatgtttctgctgag
aaaatgatatttggagttgggggtgtagatcctgcaagaagggctgaactaataaaggtg
ctggacattgatctgtcttggaggatgcacaaagtatctgatggtcagagaagacgagtt
caaatctgtatgggtcttctcaagccatttaaggttcttcttcttgatgagatcacagtt
gaccttgatgtgctgggaagagctgaccttcttaagtttctcatcaaggaatgtgaagag
agaggtgctatagtcatctatgcgacacatatatttgatgggctcgagaactggccaaca
catattgtgtatgtggctcgcggaaagttacaattatcattgcccatggaaaaagttaag
gagatgtcaaatttgtcattaatgaggacagtggagagttggctgaggaaagaacgagat
gaggagagaaaaaggaggaaagaaagaaaagcaaatggcctcccagaatttgagaagcgt
attgaaggcacttgtgtcgttggtgatcctgctcatgctgctgctcgtgtaacaaacaat
ggatgggctgcaggaaggctgcattccacccttgctggcgaagacaacttcaccttcagc
tcaaacagagtactaagacaatag
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