Chenopodium quinoa (quinoa): 110702186
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Entry
110702186 CDS
T05764
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110702186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110702186
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110702186
Complex C
U5 SnRNP specific factors
110702186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFL1
EFG_III
MMR_HSR1
Roc
EF-G_D2
Ras
Motif
Other DBs
NCBI-GeneID:
110702186
NCBI-ProteinID:
XP_021735556
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MDDSLYDEFGNYIGPEIDSDQDNDSDAEIPSDDDADKRPSDDEAPSSAAGPTNGWMTTSH
GVEDDEDTEMADNQVVLAEDKKYYPTAEEVYGEDVETLVEDEDELPLEQPIIRPVKALKF
ELGVKDSSTYVSTQFMLGLMSNPNLVRNVALVGHLHHGKTLFMDMLVEQTHHISTFDTKN
ERHMRYTDTRFDEQERRISIKSVPMSLVLEDSNSKSFLINIMDAPGHVNFSDEMSAALRL
ADGAVLVVDAAEGVMVNTERAIRHATQECIPIVVVINKVDRLITELKLPPKDAYHKLRHT
LEIINNHITAASSTAGDVQLIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGVPFDASK
FAARLWGDMYYHPDSRSFKRKPPATGGERSFVQFILEPLYKIYSQVIGEHRKSVEATLAE
LGVTLPNAAYKLNVRPLLRLACSSVFGTATGFTDMLVQHVPCGKEASSRKVDHIYTGPKE
TMVYNSMENCDPSGPLMVNITKLYPKPDCSVFDAFGRVYSGTIQTGQTVRVLGEGYSPED
EEDMTVKEVTKLWVYQARYRIPVSKAPPGSWVLIEGVDASIMKTATLCSVDYDEDVYIFR
PLQFNTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLD
SIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAE
DIESGIVSIDWPRKKLGDFFQSKYEWDLLAARSIWAFGPDKQGPNILLDDTLPSEVDKNL
LSAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGTGQLIPTARRVAYS
AFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVI
ESFGFETDLRYHTQGQAFCSSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTR
RRKGMSEDVSIQKFFDDAMVVELAQQAADLHLQMM
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagcttatacgacgagttcggcaactacattggccccgaaatcgactccgac
caagacaacgattccgacgccgaaatcccctccgacgatgacgccgacaaacgcccttcc
gacgacgaagctccttcctccgccgccggacccaccaacggctggatgacaacttcacac
ggcgtcgaagacgacgaagacactgaaatggccgacaatcaggttgttcttgccgaagac
aagaaatactaccctactgctgaggaagtttatggcgaagatgttgaaaccctagttgaa
gatgaagatgaacttcctcttgaacagccgattattaggcctgttaaagctctgaaattt
gaacttggtgttaaggattcgtctacttatgtttcgactcagtttatgcttggtcttatg
tcgaaccctaatttggtgcggaatgttgcgcttgttgggcatttacatcatgggaagacg
ctgtttatggatatgcttgttgagcagactcatcatatttctacttttgatactaagaat
gagaggcatatgaggtatacagatacgaggtttgatgagcaagagaggagaatttctatc
aagtctgtgccaatgtcgcttgttcttgaggatagtaactcgaaatcatttttgattaat
attatggatgccccaggtcatgtgaatttctcagatgagatgagtgctgctctaaggctc
gctgatggggctgttctggttgttgatgcagctgaaggtgtcatggtcaataccgagagg
gctattcgtcatgcaactcaggagtgtatcccaatagtagttgttattaataaggttgac
aggttgataacagagcttaaattgcctcctaaagatgcctaccataaactgaggcatact
ttagaaatcatcaacaaccacatcacggcggcctcttccactgctggagatgtccagctt
atagatccagcagcggggaacgtttgttttgccagcgcaacagcaggatggtcattcact
ctgcaatcatttgcaaagctatatgtgaaactacatggagtaccatttgatgcaagtaag
tttgctgctcgtctgtggggagacatgtactaccatccagacagcagaagttttaagaga
aaacctcctgcaactggaggggaaagatcttttgttcaatttatcttagagccactgtat
aaaatatatagtcaagtcatcggggagcatagaaagagtgtggaggcaacattagcagaa
cttggggttacacttccaaatgcagcctacaagttgaatgttcgaccattgttaagactt
gcctgtagctcagtttttggtacagcaacaggcttcactgatatgctagttcagcacgtt
ccttgtggaaaagaagcttcttcaagaaaggtcgatcacatatatactggtccaaaagag
actatggtttacaactccatggagaattgtgatccatcaggaccacttatggttaatatt
accaaactctatccgaaaccagattgcagtgtttttgatgcctttggtagagtgtacagt
ggcacgatccaaacaggccagactgttcgtgtgctaggagaagggtactcacctgaggat
gaagaagatatgacagtgaaagaagttacaaagttgtgggtttaccaggctcgttatagg
atccctgtaagcaaggctccaccaggttcatgggttcttattgaaggtgtagatgcctct
atcatgaagactgcaacactttgtagcgttgattatgatgaagatgtatacatattccgc
cctcttcagttcaatacactttcagtggtgaaaactgctacagagcctcttaatcctagt
gaactaccaaaaatggtcgagggtcttagaaaaatcagcaagagctaccctctagccatt
actaaagttgaggaatcgggggagcatacaattttgggcactggggagttataccttgat
tctatcatgaaggacctgagagagctttattctgaagtagaagtcaaggtagcggatcca
gttgtctcattttgtgaaacagtggtagagtcttcatcaatgaagtgttttgctgaaact
cccaacaagaagaacaagattactatgattgcagaacctttggaaagaggtctcgcagag
gatattgagagcggtatcgtgagcattgattggccacgaaaaaaattgggagatttcttc
caatctaagtatgaatgggatttgctggctgcccgttctatatgggcttttggaccagat
aagcaggggcctaacatattattagatgacacgcttcctagtgaagttgacaagaacttg
ctgagtgctgtgaaggattctattgttcaaggctttcagtggggtgctcgagaaggtccc
ctctgcgatgaaccaatcagaaacgtgaaattcaagatagttgatgctaggattgctcct
gagccactacatcggggtactggacaattaatccccacagcccgtcgtgtggcttattca
gctttcctcatggcaacccctcgtcttatggagccagtgtattatgtggagatacaaaca
ccaatagattgtgtttctgcaatctacacggttttatctcgtaggcgtggccatgtgact
gctgatgttccgcaaccagggaccccagcgtatattgtcaaggcatttttgcctgtgata
gagtcatttggatttgagacagatttaaggtatcatacccaaggtcaggccttctgctct
tctgtgtttgatcattgggctattgtccctggcgatcccctagacaagagcattgtccta
cggcctcttgaacctgccccaatacagcaccttgcaagagaattcatggtgaaaacaagg
cgtagaaagggtatgagtgaggatgttagcatccagaagttctttgatgacgctatggtt
gtggagctggctcaacaggccgcagatcttcatctgcagatgatgtga
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