KEGG   Chenopodium quinoa (quinoa): 110702509
Entry
110702509         CDS       T05764                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1-like
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110702509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqi03021]
    110702509
Enzymes [BR:cqi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110702509
Transcription machinery [BR:cqi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     110702509
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 110702509
NCBI-ProteinID: XP_021735921
LinkDB
Position
Unknown
AA seq 1455 aa
MLSSMDDDVSIVNEVPVGILSGVHFNVLTENYAENISVLTIESPAGVTDPKLGFPNPTSQ
CATCGARSNKQCEGHFGVIHFPYTIIHPYFTSEVVQILNKICPGCKSLRRERRTKGAKAG
AKHDSSRVCNPCKYCAVGRPSIRFRVSTNDLFRKTAITVELTERPQNKYQLENFWDFIPK
DVQVEESVNNNNNKRVLSPAQVYHLLKDVDPSFIKEFVSRKDALFLNCFAVTPNCHRVTE
LIHPFSTGQKLIFDDRTRAFRKLVDFRGAANELASRVLDCLKLSKLRLEKSNNDSDNVDV
LNTSASKWMKEVVLTKRSDHIIRSVVTGDPYLKLCEIGIPCYIAERLQISDHLNSLNWEK
LTASCNLRLLEKGEVYVRRKGDLVSVREMEDFQFGDLIYRPLNDGDIMLINRPPSVHQHS
MLALHVKILPINSVVSINPLCCAPLQGDFDGDCLHGYVPQSMEARVELRELVGLDKQLRN
EQNGRNLLSLAHDSMTAAYLLTAEENVLSKPQVQNLEMLCPPKLLSSPANSDFWTGKQIF
SMLLPPEFDYVSPSNGVQITKGELISSPTGSSWFRGDADGNFFESLINHFGGKFLDYLDA
AQSVFCEYLSSRGLSVSLLDLYLCSDGHLRKNLVDEVSCGLQEAEKNCHMTQFLVKSSIK
YLLDDEEENQTAMLLEVDKLCCEKQKSAGLSRASASAFKYVFRDIQNLTYQYAASDNALL
AMMKSGSKGNLSKLVQQSMCLGLQHSLVPLTFRLPHKLSCSAWNELKEKNSNFQENFECA
KNFIPTAVVEGSFVTGLNPLECFIHSVTCRDSTFSDHASVPGTLMRKLSFFMRDIQLAYD
GTVRNAYGNQLVQFSYAVDKGESSSQGNDESIGESMNACEAVGGHAVGALAASAFSEAAY
GALDQPVTVLEPSPLLNFKKVMESGSRKAKGSRTVSLFLSQKLRRLRYGSEYGVLEVKNH
LEKLLFSDIVSTVMILYSPENHNRMQICPWVCHFHVSKDILKKMRLKVFSIIDALKRKCE
ATASLANVQLVSKNGCRSDAGNDTTIVCITATITESPRKSSTDLYSVREVVIPSLLGSVV
KGFAEVDKVEILWHDHPVESRIQKKPPGGELYLSVSLSANCKSKNMWSRLMNNCLPIMDL
IDWTRSYPDDLSEINSAFGIDVAWRCFLENLRSAATDTGKTILPQHLILLADCLSVTGEF
VGLSPKGVARQKALVSVSSPFMLACFNNAGPNFIKAAKKGAADGLLGSIDALAWGKMPRL
GTGAQFDFIYSGKGHEIQKPVDIYNLLASHTSSHDSEIKINLPPNDQTILSEKLGAHHVK
KWSNAKVFNAAIPKKFLQKHFSVDDIWKLGRIWKRILYKYEIDDKLSDVDKAMLLMALKF
HPHREEKIGSGAVDIKVGHHAEHKDSRCFVLERDDGTFEDFSYKKCVFGALEIIAPSRAK
LYQTRWAKNGTTQKV
NT seq 4368 nt   +upstreamnt  +downstreamnt
atgctgagttccatggacgatgacgtcagtattgtgaatgaagtgcctgttgggattcta
tcaggagttcactttaatgtgctgactgaaaactatgcagagaatatatcggtgttaact
attgaaagtcctgccggagtgactgatccaaagttgggatttccaaatccaacttcccag
tgtgccacctgtggtgcaagaagcaataaacagtgcgaaggtcattttggtgttatccat
tttccatacacaattatccacccatattttacgtctgaagttgtacaaattttgaacaaa
atctgcccaggatgtaaatctctccgaagagaaagacgcactaagggtgcaaaagcaggg
gctaagcatgattcgtcaagggtttgtaatccttgtaaatattgtgcagtaggaaggcca
tctatcagatttagagtttccaccaatgacttatttaggaagacggcaattaccgtagaa
cttactgagagaccacaaaacaaataccagcttgaaaatttttgggattttattcctaaa
gatgttcaagtggaagaaagtgtgaacaataacaataataaaagagtgttgtcacctgca
caggtctaccatttactaaaagatgttgacccaagcttcataaaagaatttgtttccaga
aaagatgcgcttttccttaattgctttgcagtgacccctaattgtcatcgtgttactgaa
cttattcatccattttctactggacagaagttaatttttgatgaccgaactagggctttc
aggaagctggttgatttcaggggtgctgccaatgagttggcgtctcgtgtcctagattgc
ttgaaactttcaaagttacgcctggaaaagtccaacaatgattctgataatgtagatgtg
ttaaatacatcagcttctaaatggatgaaggaagtagttcttacgaagagaagtgatcac
ataattcgctccgttgtcactggtgatccttatttgaaactctgtgagattggcatccct
tgttatatcgcagaaaggctgcaaatatctgatcatttgaactctttgaactgggagaag
ttgactgccagctgcaatttgaggcttcttgagaagggagaggtctatgttcgcagaaaa
ggtgatttggtttctgttcgtgaaatggaggacttccaatttggagaccttatatatagg
cctttgaatgatggtgatattatgctaataaataggcccccttcagttcatcaacattca
atgcttgctttgcatgttaaaattcttccgataaattccgttgtctccataaatcctttg
tgctgtgctcctttgcaaggagattttgacggtgattgcctgcatggctatgtccctcag
tcaatggaagctagagtggagttaagggagctcgtgggccttgacaaacagttaagaaat
gaacagaatggaagaaacttgctctcactggcacatgatagcatgactgctgcttatttg
ctcacggctgaggagaatgttctgtccaaacctcaagtgcagaatcttgagatgctttgt
cccccaaaattgctttcatctcctgcaaattctgatttttggactgggaagcaaatattc
agcatgctattgccacctgaatttgattatgtatctccttcaaacggtgtacaaattact
aaaggagagttaatctcatctcctactgggtcatcttggtttcgtggggatgcagatgga
aacttttttgaaagtcttattaatcattttggtgggaaatttctggattatcttgatgct
gctcaaagtgttttttgtgaatatttgtcatcaaggggattgagtgtctctctactggac
ctttatctgtgttctgatgggcacctgcgtaagaatttggttgatgaagtctcttgtggt
cttcaagaagcagaaaagaattgccatatgacacagtttttggttaaatcttccataaaa
taccttcttgatgatgaagaagaaaaccaaactgctatgttacttgaggttgataaacta
tgctgtgaaaaacagaagtctgctggtctaagtcgagcttctgccagtgccttcaaatat
gttttccgagatattcagaatttgacttatcaatatgctgctagtgacaatgctttgttg
gccatgatgaaatctggaagcaaagggaatctgtcaaaattagttcagcaaagtatgtgt
cttggtttacaacattcacttgtaccattgactttcaggctccctcacaagctttcgtgt
tctgcttggaatgagctgaaagaaaaaaattcaaactttcaagaaaattttgaatgcgcc
aaaaatttcattcctactgctgtggtggaaggttcatttgtcacaggcttgaaccctctt
gaatgctttattcattccgtaacatgtcgagatagtacatttagtgatcatgctagtgtc
cctggtaccttaatgcgaaagctttcatttttcatgcgtgatatacaattggcctatgat
ggcactgtaagaaatgcatatggaaatcaacttgttcaattttcttatgctgttgataag
ggtgagtcttcctcacaaggaaatgatgaatcaattggtgagagcatgaatgcatgtgaa
gctgttggcggtcatgctgttggtgcattggcagcttctgccttttctgaagctgcatat
ggtgcactagaccaacccgtcactgttctggaaccttctcctttattaaactttaagaaa
gtaatggagagtggttccagaaaagccaaaggaagcaggactgtttcactttttctctca
caaaagctcagaaggttgcgttacggttctgaatatggggtcttagaagttaaaaatcat
cttgagaaacttttgttttcggatattgtctcaacagttatgatactctattctccagag
aaccataatcgaatgcagatttgcccttgggtttgccatttccatgtgagcaaggatatt
ctgaagaaaatgcggctgaaagttttttcaattattgatgctctcaagaggaaatgtgaa
gcaactgcctcccttgctaatgtacaactagtgagcaagaatggttgtcgttctgatgct
gggaatgatactaccattgtatgcattactgctaccataactgaaagtccaaggaaatca
tctacagatttatattcagttcgagaggtggtaataccaagtcttctgggatctgtagta
aaaggatttgctgaggttgataaggtggagattttatggcatgatcatccggtggaatca
aggattcagaaaaagccacctggtggtgaactatatctaagtgtctctctgtcagcaaat
tgcaaaagcaaaaatatgtggagtagactaatgaacaattgtcttccaatcatggatttg
atagattggacacgcagttatcctgatgacctgagtgagataaattcagcttttggaatt
gatgttgcctggcgatgcttccttgagaatttgagaagtgctgctaccgatacaggcaaa
actattcttccccagcacttaattctactggcagattgtctgtctgtgacaggggaattt
gtagggttgagtccaaaaggggttgctcggcagaaagctcttgtatctgtttcgtcacca
tttatgttggcatgctttaataatgctggacctaacttcataaaggctgctaagaagggg
gctgctgatgggctactaggaagcatagatgctttggcttgggggaagatgccacgtctg
ggaactggtgcacagtttgattttatatattctggcaaggggcatgaaatccagaagcct
gtggatatctataacctgctggcaagccacacaagttctcatgatagtgaaattaaaatc
aatttgccccccaatgatcagacgattttatctgaaaaacttggtgctcaccatgttaaa
aaatggtcaaatgcaaaagttttcaatgcggcgataccaaagaaattcttacagaagcat
ttctctgtggatgatatttggaagcttggtcggatatggaagaggatattgtacaagtat
gaaattgatgataagttgagtgacgttgacaaggcaatgctgttgatggctttaaaattc
cacccacaccgagaggagaagattgggagtggagctgtagatattaaggttggtcatcat
gctgagcataaagacagccgttgcttcgttttggagagggatgatggaacttttgaagac
ttctcatacaaaaagtgcgtttttggtgcgctggagattattgctcctagtagggcaaaa
ctctatcagaccagatgggccaaaaatggcaccacgcaaaaggtctga

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