Chenopodium quinoa (quinoa): 110708480
Help
Entry
110708480 CDS
T05764
Name
(RefSeq) 5'-3' exoribonuclease 4-like
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
110708480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110708480
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
110708480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC_5
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
110708480
NCBI-ProteinID:
XP_021742305
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MGVPAFYRWLADRYPLAISNVVEEEPKEDENGVVYPVDVSRPNPNGMEFDNLYLDMNGII
HPCFHPDKRPAPTTYDEVFQSIFAYIDHLFSLVRPRKILYMAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLKKEFEAEGRTLASRERRETSDSNVITPGTEFMFVLSVALQYYVQ
KRLNNQAGWRRVKVILSDANVPGEGEHKIMSYIRLQRDLPGFDPNTRHCLYGLDADLIML
ALATHEVHFSILREVITMPSQQEKCFLCGQGGHLAADCRAKPDKNGNLIDDTPIYKKKYQ
FLQIWVLREYLQFDLEIPNPPFNMNFERLIDDFVFLCFFVGNDFLPHMPTLEIREGAINL
LMNVYRSEFAAMGGYLTDAGEVFLDKVEHFVQSVAVHEEQIFQKRVRLQQYYENNEEMKN
KARRESGDPSFEEPPPPAEDKVKLGEPGYKERYYADKFGASSPEEIDKIRKDVVLKYVEG
LCWVCRYYYQGVCSWQWFYPYHYAPFASDLKDLADLEITFFLGEPFKPFDQLLGTLPAAS
SNALPEMYRKLMTDPSSPLLEFYPSDFDIDMNGKRFAWQGVAKLPFIDEKKLLAETKKLE
ETLTVDEQRRNCVMFDMLYIHPAHPLAAQVVSYYHFYYQMPPDQRYAWPIDSYASGGMNG
YLWLSERNGWRQVVASPVAGLPNIMNNQTLNVTYLNPLPRKHIPEPPKGAIIPAKVIKST
DVKPFPPLWHEDNGNRRQFGRERPQVPGAIRGPQLGEAAHRLLKNTLNIKHTDSSPGLLD
YMPHRNHPGSHMINRPRPAGPAGYERGYYDDNSYNYGHHHTPRPMANGHRMPYEPRGSRH
NDRLPHREDDRDLGAAMSNMTLGGIRNRPPALMRPRMQNSGPMHSQQNNFVQNMGPIPSP
PINWINRPVAGNSMQFRQQETSPQKSQKQVYQMKTQRPTQQE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgggggttcccgcattctataggtggttagctgatcgctacccattggcgatttccaac
gttgttgaagaagaaccaaaggaagatgaaaacggcgtcgtttaccctgttgatgtttca
agacctaatcctaatggcatggagtttgataatttgtatttggatatgaatggaattatt
catccttgttttcacccggataaaaggcctgcacctacaacatatgatgaggtgttccaa
tcgatttttgcatatattgatcatttattttcattggttcgtccaaggaagattctctac
atggcaattgatggagttgctccaagggctaaaatgaatcagcaacgttcacggcgcttc
agagctgcaaaagatgctgcagaggctgaagcagaggaggaaagactgaaaaaagagttt
gaggctgaaggaaggactttggcttctagggagaggcgagaaaccagtgactcaaatgtc
atcactccaggtacagaatttatgtttgtgctctcggtggcacttcagtattatgtacag
aagaggttgaacaaccaggctggctggcggagggtaaaggttattctatccgatgctaat
gtgcccggcgaaggagaacataaaattatgtcgtatattcggttgcaaagagatctccct
ggttttgatcccaatactcgacactgcttgtatggtttggatgctgatctgattatgttg
gcgttggccacgcatgaggtgcacttttcaattctgagagaggtcatcactatgccttca
caacaggagaaatgttttctttgtggtcaaggtggtcatttggcagcagattgtcgtgct
aagcctgataaaaatggaaacttgatagatgacactcctatatacaagaaaaaatatcag
ttcctccaaatttgggtattaagagaatatctgcaatttgacctggaaattcctaatcct
ccctttaatatgaattttgaacgtttaattgatgatttcgtgttcctgtgtttcttcgtt
ggcaatgacttccttccgcatatgcctacactagaaattcgagagggtgctataaacctg
ctgatgaatgtatacagaagcgaatttgcggctatgggtggttatcttactgatgctggt
gaagtctttctagataaagtggaacattttgttcagtcagttgcagttcatgaagagcaa
atcttccagaaacgggttcgcttacagcagtattatgagaacaatgaggagatgaaaaac
aaggctagaagagaatcaggagatccctcctttgaagagccaccacctccagcggaagac
aaggtcaagcttggggagcctggatataaggagagatattacgccgataaatttggtgca
tccagtccagaggaaattgacaaaatcaggaaagatgtggttttgaaatatgtggaaggt
ttatgttgggtttgccgttactactaccaaggtgtttgctcatggcaatggttctatcca
taccattatgctccatttgcttctgatctaaaagatctagctgatctagaaattacattt
ttcttgggagagcctttcaagccatttgatcaactcttgggaactctaccagctgcaagt
tccaacgctttgccggagatgtacaggaaattgatgacagacccatcttcacctctgctt
gagttttatccttctgattttgatattgatatgaatggtaaacgtttcgcttggcagggt
gttgcaaagttgccattcattgatgaaaagaaattgctggctgaaaccaagaaacttgag
gaaactttgacggtagatgagcagcgccggaactgtgtgatgtttgatatgctatatatc
catcccgcgcatcctttagctgctcaagttgtgtcatattaccatttctactatcagatg
cctcctgaccaaagatatgcttggccaattgacagctatgccagtggtggaatgaatggt
tatttgtggttatctgaaagaaatgggtggaggcaagtggtcgcttcaccagttgctggg
ctacccaatattatgaataaccaaactttaaatgtgacatatttaaatcctctgcctcgt
aaacacatcccggagcctccaaagggtgcaattataccagctaaggtgatcaaatctact
gacgtgaaacctttccccccgttatggcatgaagacaatggcaataggcgtcaatttgga
cgtgaaaggcctcaagtaccaggagcaatacgggggcctcagttgggtgaagctgctcat
cgtcttcttaagaacacattaaatattaaacatactgattcatctcctggattattggat
tatatgccccatcggaatcatccaggaagccatatgattaataggccaaggccagctgga
cctgcagggtatgaaagaggctactatgatgataacagttacaattatgggcatcatcat
actccccggcctatggcaaatggccacagaatgccctatgagccccgtggaagtagacac
aatgacagattaccacacagagaggatgaccgtgatttaggagctgctatgtcgaatatg
acactaggagggattcgtaatagaccaccagctttgatgaggccaaggatgcaaaattct
gggcccatgcatagtcaacaaaacaattttgtccaaaatatgggtcctattccgtcaccc
cctatcaactggattaacagaccagtagctggaaacagtatgcaattcagacagcaggag
acatcaccccagaagtcgcaaaaacaagtttaccaaatgaagacacaacgaccaacacaa
caagaatga
DBGET
integrated database retrieval system