Chenopodium quinoa (quinoa): 110736536
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Entry
110736536 CDS
T05764
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110736536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110736536
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110736536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
AAA_23
Arf
SMC_N
AAA
AAA_28
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
110736536
NCBI-ProteinID:
XP_021772457
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MADPQSPMVEINGLEFTYPGIDGHPPPGSTPLIQDFSLSLFPGDRCLLVGANGAGKTTIL
KILGGKHMVEPHMVRVLGRSAFHDTNLTSSGDLCYLGGEWKRDVAFAGFEVSIQIDVSAE
KMIFGVGGVDPARRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITV
DLDVLGRADLLRFLIKECEERGAIIIYATHIFDGLENWPTHIVYVARGKLQLSLPMEKVK
EMSNLSLMRTVESWLRKERDEERKRRKERKANGLPEFEKRVEGTRVVGDPAHAAARVTNN
GWAAGRLHSTLAGEDNFTFSSNRVLRQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccacaatctccaatggtcgaaatcaacggcttagaattcacttaccctgga
atcgacggtcatcctcctcctggctccacccctttaatccaggatttctctctttccctc
tttcccggtgatcgttgtcttctcgtcggtgctaatggcgcggggaagacaacaattctg
aagatattaggagggaagcatatggttgagcctcatatggttcgggttcttgggcgatcc
gcttttcacgatactaatttgacttcttctggtgatttgtgttatcttggtggagagtgg
aagcgtgacgttgcttttgctggattcgaggtttctatacagatagatgtttctgctgag
aaaatgatatttggagttgggggtgtagatcctgcaagaagggctgaactaataaaggtg
ctggacattgatctgtcttggaggatgcacaaagtatctgatggtcagagaagacgagtt
caaatctgtatgggtcttctcaagccatttaaggttcttcttcttgatgagatcacagtt
gaccttgatgtgctaggaagagctgaccttcttaggtttctcatcaaggaatgtgaagag
aggggtgctataatcatctatgcgacacatatatttgatgggctcgagaactggccaaca
catattgtgtatgtggctcgcggaaagttacagttatcattgcccatggaaaaagttaag
gagatgtcaaatttgtcattaatgaggacagtggagagttggctgaggaaagaacgagat
gaggaaagaaaaagaaggaaagaaagaaaagcaaatggccttccagaatttgagaagcgt
gttgaaggcactcgtgttgttggtgatcctgcccatgctgctgctcgtgtaacgaacaat
ggatgggctgcaggacggctgcattccacccttgctggtgaagacaacttcaccttcagc
tcgaacagagtcctaagacaatag
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