Chenopodium quinoa (quinoa): 110737046
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Entry
110737046 CDS
T05764
Name
(RefSeq) 5'-3' exoribonuclease 4-like
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
110737046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110737046
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
110737046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC_5
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
110737046
NCBI-ProteinID:
XP_021773096
UniProt:
A0A803KPL1
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MGVPAFYRWLADRYPLAISNVVEEEPKEDENGLVYPVDVSRPNPNGMEFDNLYLDMNGII
HPCFHPDKRPAPTTYDEVFQSIFAYIDHLFTLVRPRKILYMAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLKKEFEAEGRTLASKERRETSDSNVITPGTEFMFVLSVALQYYVQ
KRLNNQAGWRRVKVILSDANVPGEGEHKIMSYIRLQRDLPGFDPNTRHCLYGLDADLIML
ALATHEVHFSILREVITMPSQQEKCFLCGQGGHLAADCRAKPDKNGNLVDDTPIYKKKYQ
FLQIWVLREYLQFDLEIPNPPFTMNFERLIDDFVFLCFFVGNDFLPHMPTLEIREGAINL
LMNVYRSEFAAMGGYLTDAGEVFLDKVEHFVQSVAVHEEQIFQKRVRLQQYYENNEEMKN
KARRESGDPSFEEPPPPVEDKVKLGEPGYKERYYADKFGASSPEEIDKIRKDVVLKYVEG
LCWVCRYYYQGVCSWQWFYPYHYAPFASDLKDLADLEITFFLGEPFKPFDQLLGTLPAAS
SNALPEMYRKLMTDPSSPLLEFYPSDFDIDMNGKRFAWQGVAKLPFIDEKKLLAETKKLE
ETLTVDEQRRNCVMFDMLYIHPAHPLAAQVVSYYHFYYQMPPDQRYAWPIDSYASGGMNG
YLWLSERNGWRQVIASPVAGLPAITNNQTLNVTYLNPLPRKHIPEPPKGAIIPAKVIKST
DVKPFPPLWHEDNGNRRQFGRERPQVPGAIRGPQLGEAAHRLLKNTLNIKHTDSSPGLLD
YMPHRNHPGNHMINRPRPAGPAGYERGYYDDNSYNYGHHHMPRPMANGHRMPYEPRGIRH
NDRLPHREDDRDLGAAMSNMTLGGIRNRPPALMRPRMQNTGPMHSQQNNFVQNMGPIPSP
PINWINRPVAGNNMHFRQQETSPQKPQKQVYQMKTQRPTQQE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgggggttcccgcattctataggtggttagctgatcgctacccattggcgatttccaat
gttgttgaagaagaaccaaaggaggatgaaaacggcctcgtttaccctgttgatgtttca
agacctaatcctaatggcatggagtttgataatttgtatttggatatgaatggaattatt
catccttgttttcacccggataaaaggcctgcacctacaacatatgatgaggtgttccaa
tcaatttttgcgtacattgatcatttatttacattggttcgtccaaggaagattctctac
atggcaattgatggagttgctccaagggctaaaatgaatcagcaacgttcacggcgcttc
agagctgcaaaagatgctgcggaggctgaagcagaggaggaaagactgaaaaaagagttt
gaggctgaaggaaggactttggcttctaaggagaggcgagaaaccagtgactcaaatgtc
atcactccaggtacagaatttatgtttgtgctctcggtggcacttcagtattatgtacag
aagagattgaacaaccaggctggctggcggagggtaaaggttattctatccgatgctaat
gtgcccggcgaaggagaacataaaattatgtcgtatattaggttgcaaagagatctccct
ggttttgatcccaatactcgacactgcttgtatggtttggatgctgatttgattatgttg
gctttggccacacatgaggtgcacttttcaattctgagagaggtcattactatgccttca
caacaggagaaatgttttctttgtggtcaaggtggtcatttggcagcagattgtcgtgct
aagcctgataaaaatggaaacttggtagatgacactcctatatacaagaaaaaatatcag
ttcctccaaatttgggtattaagagaatatctgcaatttgacctggagattcctaatcct
ccctttactatgaattttgaacgtttaattgatgatttcgtgttcctgtgtttctttgtt
ggcaatgacttccttccacatatgcctacactagaaattcgagagggtgctataaacctg
ctgatgaatgtatacagaagcgaatttgcggctatgggtggttatcttactgatgctggt
gaagtctttctagataaagtggaacattttgttcaatcagttgcagttcatgaagagcaa
atcttccagaaacgggttcgcttacagcagtattatgagaacaatgaggagatgaaaaac
aaggctagaagagaatcaggagatccctcctttgaagagccaccgcctccagtggaagac
aaggtcaaacttggggagcctggatataaggagaggtattatgccgataaatttggtgca
tccagtccagaggaaatcgacaaaatcaggaaagatgtggttttgaaatatgtggaaggt
ttatgttgggtttgccgttactactaccaaggtgtttgctcatggcaatggttctatcca
taccattatgctccatttgcctctgatcttaaagatctagctgatctagaaattacattt
ttcttgggagagcctttcaagccatttgatcaactcttgggaactctaccagctgcaagt
tccaacgctttgccggagatgtacaggaaattgatgacagacccatcttcacctctgctt
gagttttatccttctgattttgatatcgatatgaatggtaaacgcttcgcttggcagggt
gttgcaaagttgccattcattgatgaaaagaaattgctggctgaaaccaagaaactggag
gaaactttgacggtagatgagcagcgccggaactgtgtgatgtttgatatgctatatatc
catcccgcgcatcctttagctgctcaagttgtgtcatattaccatttctactatcagatg
cctcctgaccaaagatatgcttggccaattgacagctatgccagtggtggaatgaatggt
tatttatggttatctgaaagaaatgggtggaggcaagtgatcgcttcaccagttgctggg
ctacccgctattacgaataaccaaactttaaatgtgacatatttgaatcctctgcctcgt
aaacatatcccggagcctccaaagggtgcaattataccagctaaggtgataaaatctact
gacgtgaaacctttccccccgttatggcacgaagacaatggcaataggcgtcaatttgga
cgtgaaaggcctcaagtaccaggagcaatacgtgggcctcagttgggtgaagctgctcat
cgccttcttaagaacacattaaatattaaacatactgattcatctcctggattattggat
tatatgccccatcggaatcatccaggaaaccatatgattaataggccaaggccagctgga
cctgcagggtatgaaagaggctactatgatgataacagttacaattatgggcatcatcat
atgccccggcctatggcaaatggccacagaatgccctatgagccccgtggaattagacac
aatgacagattaccacacagagaggatgaccgtgatttaggagctgctatgtcgaatatg
acactaggagggattcgtaatagaccaccagctttgatgaggccaaggatgcaaaatact
gggcccatgcacagtcaacaaaacaattttgtccaaaatatgggtcctattccgtcaccc
cctatcaactggattaatagaccagtagctggaaataacatgcatttcagacagcaggag
acatcaccccagaagccgcaaaaacaagtttaccaaatgaagacacaacgaccaacacaa
caagaatga
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