Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ002586
Help
Entry
CpipJ_CPIJ002586 CDS
T01079
Name
(GenBank) U5 snRNP-specific protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ002586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ002586
Spliceosome [BR:
cqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CpipJ_CPIJ002586
Complex C
U5 SnRNP specific factors
CpipJ_CPIJ002586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
EFG_IV
zf-MYND
EFG_C
GTP_EFTU_D2
TPR_11
Motif
Other DBs
NCBI-ProteinID:
EDS38006
UniProt:
B0W7H1
LinkDB
All DBs
AA seq
964 aa
AA seq
DB search
MNPNLLPPPLATSAIDLLQEMLLERGAIRADFMLYQDFGSAAGKCDADAARFRNTGNRLY
LDGKYGEALVWYNRSICFTEKETDQLATGYGNRSAVYFEQGEQQIAAGRSKVPSPRMLCY
ENWGVKFSNSLIPCPGCVFFMYCGEECRQKSWNLWHQFECPVAPKLRNFSNFNLLSTPRQ
FFYDLFLFDDNLAEQKRFEFELDYSNLDRRELIRILHNTEARRNPIGELNGYLKAKLISY
GYFLVFQANPLMITVTTGRRNYTIQNLNKLARLATTLLSNNRDYLGRIISWIFPAIPANI
HMCDPNAHTAFESGRMKMVLLRPDSVHSTSNRCDDQDQALHKQRRIDVEVIVPTPDFTGW
KASAHSEQDPRASSDRRQATLIASHVVHWPNLHGICQDMLSCDQNAQLMVHSSKIMLARN
MSGTLHAGQEVRVLGENYSFVDEEDSYTLPGIKLSSPLRITLLSHVVNMNEDVFIYRPLK
LNTQSIIKIAIEPVNPSEHPKIMDGLRKVNKSYPLLDCMNPASTGRVVETSSLKWFAEAY
LIAEPLAKTLAEDEASILAFGPYNTSTHILVDEKLSVDCLKQYKALAYRVEEYGEWFRGL
LNLKGTIPVRYKGNTYHIPVAIWLLDTHPRYAPLCYNQPTSDMHIKVSMYVDHNGKIYLP
YLHDWNPAHSDLLGLIQVMIVTFGDYPPVYSKPKNAAKTEVMPLQQQQQTPYPTQSFMPQ
PPTSTQSPYCPYPQQQQQQFPPYPAAAGGGYVGYGQPSGAGTSYPPYMPQGMPTAGGYNT
GYNPSAQGTGTITEEHIKASLVSAVEDKLKRRIQEKVNQCHVKDSIVQGFQLGSRDGPLC
EEPIRNVKFKIIDQSIAHETFHHRGRQIIPTARRVAYSAFPMATPRLMESYLFVQVQVPA
DCVSSVNTVLARQRGHVAQDAPVSGQVFCLSVFDSWPIVPGDPLNKSIVIRPLERNRYSN
RPNR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgaatttgcttccgccgcccctggcgacaagtgccatcgacctgctgcaggag
atgctcctcgagcgtggggccatccgggccgactttatgctgtaccaggacttcggatct
gctgctggcaagtgtgacgccgacgcggcccgctttcgcaacaccggaaaccggctctat
ctggacgggaagtatggggaagctttggtgtggtacaaccggagcatctgcttcacggag
aaggagacggaccagctggccacgggatacgggaatcggtcggcggtttacttcgagcag
ggcgagcagcagattgccgctggccgttcgaaggttccaagtccgcggatgctgtgctac
gaaaactggggagtcaagttcagcaacagcttgattccttgcccgggctgcgtcttcttc
atgtactgcggcgaggagtgtcggcagaagagctggaatctgtggcatcaattcgaatgt
ccggtagccccgaagctgcgcaatttctccaactttaatctcctgagcactccacgtcag
tttttctacgatcttttcctgttcgatgacaatttggccgagcagaagcggttcgagttc
gagttggattacagcaacctggaccgacgtgagctgatcagaattctgcacaacacggaa
gctcgtcgcaacccgatcggagagttgaacggctacttgaaggcaaagctgatttcttac
ggttacttcttggtgttccaagcgaatccacttatgataacggtcaccactggccgtcgg
aactatacgatccaaaacttgaacaagctcgctcgcctagctaccaccctgctctcaaac
aaccgcgactatctcgggcgcatcatttcctggatctttccggccatccccgccaacatc
cacatgtgcgatccgaacgcgcacacggccttcgaatccggccgcatgaagatggtgctg
ctacgaccggacagcgtgcacagcaccagcaatcggtgtgacgatcaggaccaggcactg
cacaaacagagacgcattgacgtggaggtgattgttccgacgccggactttaccgggtgg
aaggcatctgcacattctgagcaggatccacgtgcaagcagtgatcggaggcaagctacg
ctgatcgcatcgcacgtggtccattggccaaatttacacggaatctgccaggacatgctg
agctgtgaccagaacgcgcagttgatggtgcacagctcgaagattatgttggcgcggaat
atgagcgggacgttgcacgccgggcaggaggttcgagtgcttggtgagaactactcgttc
gtggacgaggaagattcctatacgctgccgggcattaaattatcatcgccgcttcgaatc
actctactatcacacgtcgtcaacatgaacgaggacgtgtttatctaccggccgctcaag
ttaaacacccagtccatcatcaagatcgccatcgaaccggtcaacccgtcggaacacccg
aaaataatggacggcctgcgcaaggtcaacaaatcctaccctttactcgattgcatgaat
ccggcgagcactggccgtgtcgtcgagacgagttcgctcaagtggttcgccgaggcgtac
ctgattgcagaaccgctggcgaagaccctggccgaggacgaggcgtcgattttggccttc
ggcccgtacaacaccagcacacacatcctcgtcgacgaaaagctgtccgtcgactgcctc
aaacagtacaaagcgttggcctatcgggttgaggagtacggtgagtggttccgggggctg
ctcaacctgaagggaaccattccggtgcggtacaagggcaacacgtaccacattccggtg
gcgatctggctgctggacacgcatcccaggtacgcgcccctttgttacaaccagccgacg
tccgacatgcacatcaaggtgtccatgtacgtggaccacaacgggaagatctatctaccg
tacttgcacgactggaacccggcgcattcggacctgctcgggctcatacaggtgatgatc
gtcaccttcggggattacccgccggtttactccaagcccaagaatgcggccaagacggaa
gtgatgccgctgcagcagcagcagcagacaccgtatcctacacaatctttcatgcctcaa
ccgcctacgagcacccagagtccgtactgtccgtatccgcagcagcagcagcaacagttc
ccaccgtacccggcggccgccggaggaggatacgttggctacggccaaccgtccggagct
ggaaccagctatccaccgtacatgccgcagggaatgcccacagccggcggttacaacacc
ggatataacccgtcggcccagggcaccggaaccatcaccgaggagcacatcaaggcctcg
ctcgtcagcgccgtcgaggacaaactgaagcggcgcatccaggagaaggtcaaccaatgt
cacgtcaaagactccatcgtgcaaggcttccagttgggctcgcgcgatggaccgctctgc
gaagaacccattcggaacgtcaagttcaaaattatcgaccaatccatcgcccatgaaacg
tttcaccaccgaggtcgccaaatcatcccaactgcccgtcgagtcgcctactccgccttc
cccatggccacaccccgcctcatggaatcgtatctcttcgtccaagtgcaagtccccgcc
gattgcgtttcctccgtgaacaccgttcttgcccggcaacgtggccacgtcgcccaggat
gcacccgtctccggccaagtcttctgcctgtccgtctttgatagctggccgatcgtcccc
ggtgatccgctcaacaagagcatcgtcatccggccgctggaacgtaatcgttattctaat
cgtccgaaccgatag
DBGET
integrated database retrieval system
