Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ005029
Help
Entry
CpipJ_CPIJ005029 CDS
T01079
Name
(GenBank) U5 snRNP-specific protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ005029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ005029
Spliceosome [BR:
cqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CpipJ_CPIJ005029
Complex C
U5 SnRNP specific factors
CpipJ_CPIJ005029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFG_IV
zf-MYND
Peptidase_M41
EFG_C
Motif
Other DBs
NCBI-ProteinID:
EDS44873
UniProt:
B0WDT6
LinkDB
All DBs
AA seq
789 aa
AA seq
DB search
MNPNLLPPPLATGAFDLLQEMLLERGTIRADFSLYQDFMDQRRDQLLVPEQGKCDADAAR
FRNTGNRLYLNGEYGEALVGGLLRARRVRVCTVQHRSGQKTGKLMPKLRVRELNCEQQIA
AGRLKGTVPSPRIDINFDINPKIPFLAKGMRDFNPGDVIMDAEPLLTAIDFNLCYENCSH
CGVKFSNSLIPCPGCVFSMYCGEKCRQKSWKLWHQFVATKLRNFSNFNLLSTPRLFFYGL
YLFDDNLAELNRFCEGKPRLDYSNLDRRELFRILQNTEDRRDPTGELNGYLEEKLISYAN
PLMVTVTTGRRNFTIQTLNKLARLATTLLSSNRDYLGRVVCRRRRGCEIDSERSEAFSYA
NQTKCSTGRMGFSKITACTVPAIGTSSDPRQATLIASHVVREWGMSSKLACGKSSLLSFR
APTSTIATTVARVLARILSERLHAGQEVRVLGENYSFVDGKRFLYAVGIDLCILKTSTII
HVNINEDVFIYQPLKLNTQFIIKITIEPVNPSEHPQIMDGLRKVNTSYPLLSTRFTVELY
LDCVMHLRNVFRDSERWCLCESVVETSSLKWFTKAFNKKNDDYRTAGEGSGRGRGEFFQV
NYDWDMLASRAIWAFGPYNTSYHILVDDKLSFEVDKTLLGSVKDSIVQGFRLGSHDGPLC
EEPVRNDKFKIIDQSIAQETVHRGVQAPADCVSSVNTVLARRRGHVTQDAPNSGSPPSIR
SASTPTCERTPKAKLSACPSPVICSTRASSSGRWNVIVNLIVRTDSPHNLVTELSNDVDK
CHSLVLVHS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgaatctgcttccaccacccctggcgaccggtgccttcgacctactgcaggag
atgctcctcgagcgtgggaccatccgggctgacttttcgctgtaccaggactttatggac
cagcgtcgggatcagctgctggttccggaacaaggcaagtgcgacgccgacgcggcccgc
tttcgcaacactggcaaccggctctatctgaacggggagtatggggaagctttggtcggc
ggtttacttcgagcacggcgagtacgagtttgcactgtacaacatcgatctggccaaaaa
accggaaaattgatgccgaagctgcgggtcagggagttgaactgcgagcagcagattgcc
gctggccgtttgaagggcacggttccaagtccgcggatcgacattaattttgacatcaac
ccgaagattccctttctggccaagggaatgagggactttaatccgggggacgtaattatg
gatgcggaaccgctgctgacggcgattgatttcaacctgtgctacgaaaactgcagccac
tgcggagtcaagttcagcaacagcttgattccttgcccgggctgcgtcttttccatgtac
tgcggcgagaagtgtcggcagaagagctggaagctgtggcatcaattcgtggccacgaag
ctgcgcaatttttccaactttaatctgctgagcactccgcgtctgtttttctacggtctt
tatctgttcgatgacaatttggccgagctgaaccggttctgcgaggggaagcctaggttg
gattacagcaacctggaccgacgtgagctgttcagaattctgcaaaacacggaagatcgt
cgcgacccgaccggagaattgaacggctacttggaggaaaagctgatttcttacgcgaat
ccattgatggtaacggtcaccactggccgtcggaactttacgatccaaaccttgaacaag
ctcgctcgcctagctaccaccctgctctcaagcaaccgcgactatctcgggcgcgtggtt
tgccggcggcgacgggggtgcgagatcgactcggagcggagcgaagcgttttcgtacgcc
aaccaaaccaagtgctcgacaggacggatgggtttcagtaaaataacagcgtgcacagtg
ccagcaatcggtacaagcagtgatccgaggcaggctacgctgatcgcatcgcacgtggtc
cgtgagtggggcatgtcaagcaagttggcctgcggaaaatcaagtcttctaagctttcgc
gccccgacatcaacgatagctacgaccgtggcaagagtgttggcgcggattttgagcgag
aggttgcacgccgggcaggaggttcgagtgcttggtgagaactactcgttcgtggacggg
aaaagattcctgtacgctgtaggaattgacctgtgcatcttaaaaacctcgactatcatc
catgtcaacataaacgaggacgtgtttatctaccagccgctcaagttaaacacccagttc
atcatcaagatcaccatcgaaccggtcaacccgtcggaacacccacaaataatggacggc
ctgcgcaaggtcaacacatcttacccattactctcgactcgattcaccgttgaactctac
ctggactgcgtgatgcacctgcgcaatgtgttccgagattccgagaggtggtgcctttgc
gagagtgtcgtcgagacgagttcgctcaagtggttcaccaaggcgttcaacaaaaagaac
gatgattacagaaccgctggagaagggtctggtcgaggacgaggcgagtttttccaggtc
aactacgactgggatatgctcgcgtcacgagcgatttgggccttcggcccgtacaacacc
agctatcacatcctcgtcgacgacaagctgtccttcgaagttgacaaaaccctgctcggc
tccgtcaaagactccatcgtgcaaggcttccggttgggctcgcacgatggaccgctctgc
gaagaacccgttcggaacgacaagttcaaaattatcgaccaatccatcgcccaggaaacg
gtccaccgcggagtgcaagcccccgccgattgtgtttcctccgtgaacaccgtccttgcc
cggcgacgtggccacgtcacccaggatgcacccaattccggttccccgccatcgattcgt
tcggcttcgacaccgacctgcgaacgcacacccaaggccaagctttctgcctgtccgtcc
ccggtgatctgctcgacaagagcatcgtcatccggccgctggaacgtaatcgttaattta
atcgtccgaaccgatagcccgcacaaccttgttaccgaactctccaacgatgtcgacaag
tgtcactcgctagtcctcgtccactcgtag
DBGET
integrated database retrieval system
