Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ005161
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Entry
CpipJ_CPIJ005161 CDS
T01079
Name
(GenBank) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CpipJ_CPIJ005161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqu03400
]
CpipJ_CPIJ005161
Enzymes [BR:
cqu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CpipJ_CPIJ005161
DNA repair and recombination proteins [BR:
cqu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
CpipJ_CPIJ005161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT_2
BRCT
mRNA_cap_enzyme
DinB_2
Motif
Other DBs
NCBI-ProteinID:
EDS45137
UniProt:
B0WE07
LinkDB
All DBs
AA seq
875 aa
AA seq
DB search
MASKRIFPVLRLLLPGADRERDSYGVRVKSLRDLYIKVLGISESSTEARKLSGYDEETGG
GGASSSEDFADRVFRLMQGRCPPEGSLTVWEVNERLDAIGGHYVNGERRRIGEELERLVG
GMSQVDQKWLIRILLKNLRLGMSLGKILGVYHAKAGQLYDRFSNLSKVCEVVESGEGLEE
LGEGGGSVELFHPVKPMLCQRVDLKLVDGMLKRDEYWLETKMDGERFQIHKDGVVFKYFS
RNSYEYSEVFGVNRNQVGSTLTPFLADLLASNVQSVILDGEMMVFDKVALIYRDKSENTD
VKAVKSDNPTLRPCFCVYDVLFLNGKSLIAVPYAERIRLLGTLIKPKVGVLTTCKRIKVE
SSEHLVELLNQAIDTHQEGVVIKKQDSTYSPNERNAGWYKIKPDYIDNLVSDFDLLIMGG
FYNAKRSFVNTYLVGVLDKSTEDTFLAVTKVGIGLSVDQWRTLNTSLRPHWREVTFRREG
RSKISEEPPGLRWGQTAPDVWIPPNHSIVLQLKGSELVRSSSFATSYTIRFPRITAIRSD
KDFKDVCTSDEFARLCSANTTVAKLAKRHVTAADLLPTSGTTSRKRKQISPLKSRQRSAP
PLPQPEEDAPPPLDDICSGLDFCVLSTAKGAPSIRELETVIRRHGGRTVKNPGPKTYAVI
AGERTFLVSRIIETRRHNVATVEWVLRTLGGPQPRTNLPDFTPNDLLAATDELREQLAER
FDRIGDSLTEPITGPDEMRALLKQMNVAESLSARELRTGQREILGVGSSLRMFRGLVARL
YEDNLKGEDGDVARYRARFGMLKFVRNGGGWVGEEEEDAGGTHVFVVENGALDRERLREW
VDGRGFGQAKVVRLEWIQASLSGKRLCEEQLYSII
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaacgcatcttcccggtgctgcgtctcctcctgccgggcgcggaccgcgag
cgggactcgtacggcgtgcgggttaaatcgctacgggacctgtacatcaaggtgctcggc
atcagcgagtccagtacggaggcgcgcaagctgtccggctatgacgaggagacggggggt
ggcggcgcttcgtcgtcggaggactttgccgatcgggtgttccggctgatgcagggccgg
tgtccgccggagggcagtttgacggtgtgggaggttaacgagcggttggacgcgattggg
gggcattatgtgaatggggagaggagacggattggggaggagttggagcggttggttggg
gggatgagtcaggttgaccagaagtggttgatacggatattgctgaagaatttgaggctg
gggatgagtctggggaagattttgggggtttatcatgcgaaggcgggtcagctgtacgat
aggtttagtaatttgagtaaggtttgcgaggtggttgagagtggcgaggggttggaggag
ttgggcgagggtggtgggagtgtggagttgtttcatccggtaaagccgatgctttgtcag
cgggtggatttgaagctggtggacgggatgctgaagcgggacgagtattggttggagact
aagatggatggggagcggttccagatccacaaggatggggtggtgtttaagtacttttcc
cggaacagttacgaatacagtgaggtgtttggtgtgaaccggaaccaggttgggtcgacg
ttgaccccttttttggcggatttgttggcttcgaatgtgcagagcgtgattctggacggg
gagatgatggtctttgacaaggttgctttgatctaccgggataagagtgaaaacacagat
gtgaaggctgtcaagtcggacaatccgacgttgagaccttgcttctgcgtgtacgacgtg
ttgtttctgaacgggaagagcctgatcgccgttccgtacgcggaacggatccgtctgctt
gggacgttgattaagcccaaggtcggcgttttgacgacctgcaagcgaatcaaggtggag
agtagcgaacacctggtggaactcctgaaccaggctatcgacacccaccaggaaggagtg
gtcatcaagaagcaggactcgacctactctccgaacgaacgcaacgccggatggtacaag
atcaagccggactacatcgacaacctggtgtcggactttgacctgctgatcatgggcggc
ttctacaacgcgaagcgaagcttcgtcaacacgtatctcgtcggagttcttgacaagtcc
acagaagacacctttctggccgtcaccaaggtcggcatcggcctctccgtggaccagtgg
cgaaccctgaacacctcgctgcgacctcactggcgcgaggtcaccttccgccgggaaggt
cgctccaagatctccgaggaacccccgggacttcgctggggccaaaccgctccggacgtg
tggatccctccgaaccactccatcgtactccagctgaaaggttccgaactcgttcgcagc
tcgtccttcgcgacctcctacacgatccgcttcccccggataaccgcgatccgcagcgac
aaggacttcaaggacgtctgcaccagcgacgagtttgcccgactctgctccgcaaacaca
accgtggccaagctggccaaacggcacgtcacggcggcggacctgctccccacatccgga
acaacctctcgcaagcgaaagcaaatctcccccctaaaatcgcgacaaagatccgcgcca
cccctcccacaaccggaagaagacgcccctccccccctcgacgacatctgctccgggctg
gacttttgcgtgctcagcaccgccaaaggcgccccctcaatccgcgaactcgagacagtc
atccgccgccacggcggtcgcaccgtcaagaacccgggccccaaaacgtacgccgtaatt
gccggtgagcgcaccttcctcgtgtcccgcatcatcgaaacgcgccgccacaacgtggcc
accgtagagtgggtgctccgtaccctcggcggcccccaaccccgcaccaaccttcccgac
tttaccccgaacgacctgctggcggcgacggacgagttgcgcgagcaactggcggaacga
ttcgatcgcattggggactcgctgacggagccgatcaccggtccggacgagatgcgcgcc
ctgctgaagcagatgaacgtggcggagagtttgagtgcgcgcgagttgagaaccggtcag
cgggagattttgggcgtggggtcgtcgcttcggatgttccgggggcttgtggcgagactg
tacgaggacaatctgaagggggaggacggcgacgtggcgcggtacagggcccggtttggg
atgttgaagtttgtgaggaatggtggcgggtgggtgggcgaggaagaggaggacgctgga
gggacgcacgtgtttgtggtggagaatggcgcgttggatagggaacggttgagggagtgg
gttgatggtcgtgggtttggccaggccaaagtggtgcggttagagtggatacaggcaagc
ttaagtgggaaacggttgtgtgaagaacaattgtatagtattatttga
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