Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ019290
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Entry
CpipJ_CPIJ019290 CDS
T01079
Name
(GenBank) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CpipJ_CPIJ019290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqu03400
]
CpipJ_CPIJ019290
Enzymes [BR:
cqu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CpipJ_CPIJ019290
DNA repair and recombination proteins [BR:
cqu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
CpipJ_CPIJ019290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
DNA_ligase_A_C
BRCT
BRCT_2
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
EDS30373
UniProt:
B0XJH0
LinkDB
All DBs
AA seq
805 aa
AA seq
DB search
MASKRIFPVLRLLLPGADRERDSYGVRVKSLRDLYIKVLGISESSTEARKLSGYDEETGG
GGASSSEDFADRVFRLMQGRCPPEGSLTVWEVNERLDAIGGHYVNGERRRIGEELERLVG
GMSQVDQKWLIRILLKNLRLGMSLGKILGVYHAKAGQLYDRFSNLSKVCEVVESGEGWEE
LGEGGGSVELFHPVKPMLCQRVDLKLVDGMLKRDEYWLETKMDGERFQIHKDGVVFKYFS
RNSYEYNVKAVKSDNPTLRPCFCVYDVLFLNGKSLIAVPYAERIRLLGTLIKPKVGVLTT
CKRIKVERRSGHQEAGLDYSPNERNAGWYKIKPDYIDNLVSDFDLLIMGGFYNAKRSFVN
TYLVGVLDKSTEDTFLAVTKVGIGLSVDQWRTLNTSLRPHWREVTFRREGRSKISEEPPG
LRWGQTAPDVWIPPNHSIVLQLKGSELVRSASFATSYTIRFPRITAIRSDKDFKDVCTGE
EFARLCSANTTVAKLAKRHVTAADLLPPSGSTSRKRKQISPLKSRQRSAPPLPQPEEDAP
PPLDDICSGLDFCVLSTAKGAPSIRELETTIRRHGGRTVKNPGPKTYAVIAGERTFLVSR
IIETRRHNVATVEWVLRTLGGPQPRTNLPDFTPNDLLAATDELREQLAERFDRFGDSLTE
PITGPDEMRALLKQMNVAESLSARELRTGQREILGVGSSLRMFRGLVARLYEDNLKGEDG
DVARYRARFGMLKFVRNGGGWVGEEEEDAGGTHVFVVENGALDRERLREWVDGRGFGQAR
VVRLEWIQASLGGKRLCEEQLYSII
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaacgcatcttcccggtgctgcgtctccttctgccgggcgcggaccgcgag
cgggactcgtacggcgtgcgggttaaatcgctacgggacctgtacatcaaggtgctcggc
atcagcgagtccagtacggaggcgcgcaagctgtccggctatgacgaggagacggggggt
ggcggcgcttcgtcgtcggaggactttgccgatcgggtgttccggctgatgcagggccgg
tgtccgccggagggcagtttgacggtgtgggaggttaacgagcggttggacgcgattggg
gggcattatgtgaatggggagaggagacggattggggaggagttggagcggttggttggg
gggatgagtcaggttgaccagaagtggttgatacggatattgctgaagaatttgaggctt
gggatgagtctggggaagattttgggggtttatcatgcgaaggcgggtcagttgtacgat
aggtttagtaatttgagtaaggtttgcgaggtggttgagagtggcgaggggtgggaggag
ttgggcgagggtggtgggagtgtggagttgtttcatccggtaaagccgatgctttgtcag
cgggtggatttgaagctggtggacgggatgctgaagcgggacgagtattggttggagact
aagatggatggggagcggttccagatccacaaggacggggtggtgtttaagtacttttcc
cggaacagttacgaatacaatgtgaaggctgtcaagtcggacaatccgacgttgagacct
tgcttctgcgtgtacgacgtgttgtttctgaacgggaagagcctgatcgccgttccgtac
gcggaacggatccgtctgcttgggacgttgattaagcccaaggtcggcgttttgacgacc
tgcaagcgaatcaaggtggagagaaggagtggtcatcaagaagcaggactcgactactct
ccgaacgaacgcaacgccggatggtacaagatcaagccggactacatcgacaacctggtg
tcggactttgacctgctgatcatgggcggcttctacaacgcgaagcgaagcttcgtcaac
acgtatctcgtcggagttcttgacaagtccacagaagacacctttctggccgtcaccaag
gtcggcatcggcctctccgtggaccagtggcgaaccctgaacacctcgctgcgacctcac
tggcgcgaggtcaccttccgccgggaaggtcgctccaagatctccgaggaacccccggga
cttcgctggggccaaaccgctccggacgtgtggatccctccgaaccactccatcgtactc
cagctgaaaggttccgaactggtccgcagcgcatccttcgcgacctcctacacgatccgc
ttccctcggataaccgcgatccgcagcgacaaggacttcaaggacgtctgcaccggcgag
gagtttgcccgactctgctccgccaacacgaccgtggccaagctggccaaacggcacgtc
acggcggcggacctgctccccccatccggctcaacctcccgcaagcgaaagcaaatctcc
cccctaaaatcgcgacaaagatccgcgccacccctcccacaaccggaagaagacgcccct
ccccccctcgacgacatctgctccgggctggacttttgcgtgctcagcaccgccaaaggc
gccccctcaatccgcgaactcgagacaaccatccgccgccacggcggtcgtaccgtcaag
aatccgggccccaaaacgtacgccgtgatcgccggcgagcgcaccttcctcgtgtcccgg
atcatcgaaacgcgccgccacaacgtggccaccgtagagtgggtgctccgcaccctgggc
ggcccccaaccccgcaccaaccttcccgactttaccccgaacgacctgctggcggcgacg
gacgagctgcgcgagcaactggcggaacgattcgatcgctttggggactcgctgacggag
ccgatcaccggtccggacgagatgcgcgccctgctgaagcagatgaacgtggcggagagt
ttgagtgcgcgcgagttgagaaccggtcagcgggagattttgggcgtggggtcgtcgctt
cggatgttccgggggcttgtggcgagactgtacgaggacaatctgaagggggaggacggc
gacgtggcgcggtacagggcccggtttgggatgttgaagtttgtgaggaatggtggcggg
tgggtgggcgaggaagaggaggacgctggagggacgcacgtgtttgtggtggagaatggc
gcgttggatagggaacggttgagggagtgggttgatggtcgtgggtttggccaggccaga
gtggtgcggttagagtggatacaggcgagtttaggtgggaaacggttgtgtgaagaacaa
ttgtatagtattatttga
DBGET
integrated database retrieval system
