Capsella rubella (pink shepherd's-purse): 17877184
Help
Entry
17877184 CDS
T02984
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
17877184
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crb01007
]
17877184
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17877184
Enzymes [BR:
crb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
17877184
Amino acid related enzymes [BR:
crb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
17877184
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
17877184
Prokaryotic type
Other AARSs
17877184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1e
tRNA-synt_1_2
DUF7685
Oberon_cc
Motif
Other DBs
NCBI-GeneID:
17877184
NCBI-ProteinID:
XP_006279922
UniProt:
R0GKJ2
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MTSFFKSFAGNPREAATMAMVQSSSYRVLSGRSCSNLRRNTSLDSFLAKRRSSVKAFSFI
YVSRYSTEPNNEFGHSSKRRSRGPVMAAKKASEGEKQEDGKYKHTVDLPKTGFGMRANSL
TREPELQKLWEEHQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKL
LQNYKVQYVPGWDCHGLPIELKVLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQMESFK
RFGVWADWNNPYLTLDPEYEAAQVEVFGQMALQGYIYRGRKPVHWSPSSRTALAEAELEY
PEGHISKSIYAIFKLVGGAKTSFLDEFIPNICLAVWTTTPWTMPANAAVAVNAKLQYSVV
EVQSLLEDEPAGTGNRKKMPGKVLKNQQKLFVIVATDLVPALEAKWGVKLIISKSFLGSD
LENCRYTHPIDSRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLPLVSPVDD
EGKFTDEAGQFSGLSVLGEGNIAVVSYLDENMSLIMEESYAHKYPYDWRTKKPTIFRATE
QWFASVEGFRTATMDAINNVKWIPHQAVNRISAMTSSRSDWCISRQRTWGVPIPAFYHVK
TKEPLMNEETINHVISIISQKGSDAWWYMSVEDLLPENYRDKAADYEKGTDTMDVWFDSG
SSWAGVLGKREALRYPADVYLEGTDQHRGWFQSSLLTSIATQGKAPYSAVITHGFVLDEK
GMKMSKSLGNVVDPRMVIEGGKNLKDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSD
IYRKLRGTLRYLLGNLHDWRVDNAVPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKI
FQIIQRFTIVDLSNFYFDIAKDRLYTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLA
EDVWQNLPFEYRNKDGSAAKFVFELKWPTLNEQWLSFPAEDVLFWQRLLELRTEVNKVLE
LARNEKMIGSSLEAKVYLHTADAGMATKLLEMSEAKNEADTLQRIFITSQVEVLSSMNEI
VSSVQHTGEYVDGENKVWIGVSRAEGSKCERCWNYSGQVGSFSDHPTLCGRCFNVIVANP
PKPAVAAAIS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgacatctttcttcaaatcctttgcgggaaatcccagggaagctgctaccatggcgatg
gttcaatcttcatcttacagagtattgtcaggtagaagttgttctaatttaaggagaaac
acgtcgttggattcttttcttgccaagcgaaggtcttctgtcaaggctttttctttcata
tatgtttcacggtattcaactgaaccaaacaatgagtttggtcattcatcaaagcgaagg
tctcgtgggcctgttatggcagcaaagaaagcatctgaaggggagaagcaagaagatgga
aagtacaagcacacagttgatttgccaaagacaggttttggtatgagagctaattctttg
acaagagaacctgaacttcagaagttgtgggaagagcaccaggtcttcaagagagtttct
gataataacaatggaggaagtttcattcttcatgatggccctccttatgccaatggagat
ctgcatatgggtcatgctctcaacaagatactgaaggatattattaatcgctataagctg
ctccaaaattataaagttcagtacgttcctgggtgggattgccatggccttccgattgag
ttgaaagttctgcagtccctggatcaggaagtgagaaaggaacttacaccattaaaatta
agggcaaaggctgcaaaatttgcaaaagcaacagtcaaaacacaaatggaatcatttaag
cggtttggagtatgggcagactggaacaatccttatctaactcttgatccggaatatgaa
gcagcccaggttgaagtatttggccagatggcgctgcaagggtacatctatagaggtagg
aagccagttcactggagcccttcatctcggactgctcttgcagaagctgaactagagtat
ccggaaggtcatatttccaaaagcatatatgctattttcaaattggttggcggagcgaaa
acaagctttttagatgagtttatccctaatatatgcttggcagtatggacaactacaccg
tggactatgccagccaatgctgctgtcgcggtgaatgcaaagcttcagtactctgttgtg
gaagtgcagtcattgttagaagatgaacctgctgggacaggcaatagaaagaaaatgcct
gggaaagttctaaagaatcaacaaaagctgttcgtgattgtagcgactgaccttgtccca
gcattagaagcgaaatggggtgtgaagcttatcattagtaaatcattccttggttcagat
cttgaaaactgcaggtacacacatccaattgacagcagggactgtccagtcgttataggg
ggtgattacataactacggaatcaggaacagggttggtccacactgcccctggacatggt
caggaggattacgcaaccggtctgaagtatgggctgcctcttgtctctccggtagatgat
gaaggaaagttcactgatgaagctggacagtttagtgggctctctgtccttggagaaggg
aatattgctgttgtcagttacctggatgagaatatgtctcttatcatggaagaatcttat
gctcataaatacccatatgattggcgaactaagaaacccacaatatttagagcgactgag
cagtggtttgcatcggttgaggggtttcgcacggcgaccatggatgcaatcaacaatgta
aaatggataccacatcaggcagtaaatagaatatctgccatgacttccagtcgatctgat
tggtgcatctcaagacaaaggacatggggtgtccctattccggccttttatcatgttaag
acaaaagaacccctcatgaatgaagagactattaaccatgttatatctataatttcccaa
aagggtagtgacgcatggtggtatatgtcagtggaagacctacttcctgagaattatcgt
gataaagcagctgattatgaaaaggggacggatacaatggacgtctggtttgactcagga
tcttcttgggctggtgtactggggaaacgtgaggctcttagataccctgcagatgtgtat
ctagaaggtacagatcagcatcgtggatggttccagagttctttgttaacaagcattgca
acacaaggaaaagccccttattctgctgttataacacatggatttgtattggatgagaag
ggtatgaaaatgagcaagtctctaggtaacgtagtggacccacgtatggttatcgaaggg
gggaaaaatttaaaggatgcacctgcttatggagctgatgttatgcgtctttgggtttct
agtgtagattacacaggggatgtactgattggtcctcagattcttcgtcaaatgtctgat
atatataggaaattgaggggaacattacgttatctcttgggcaatcttcatgattggaga
gttgataatgctgttccataccaggatttacctatcattgatcagcatgctctctttcag
cttgagaatgttgtaaagaacatacaagaatgttatgagaactaccagttctttaaaatc
ttccagatcatacaacgattcacaattgttgatctgtcaaatttctacttcgatatagct
aaagatagactgtatactggggggacttcaagttttaccagaagaagctgtcaaacagtt
ctttcaacacatcttttatccatattgagagtgattgctcccatagtacctcacctagca
gaagatgtctggcagaatcttccatttgagtacagaaataaagatggctctgcagcaaaa
tttgtcttcgaacttaaatggcctacattgaatgaacaatggctttcatttcctgctgaa
gatgtcctcttctggcaaaggcttctcgagttgaggaccgaggtgaacaaagtgctggag
ctcgcacgtaatgagaaaatgattggttccagtttagaagcaaaggtgtatctgcatact
gcagatgcaggcatggctacaaaattactagagatgagtgaagcaaagaacgaggctgac
actctgcaacgcatattcataacatcacaagttgaggtattgtcatcaatgaatgagata
gtaagcagtgtgcagcacacaggagagtatgtggatggagagaacaaagtgtggattggt
gtgtcacgagctgaggggtccaagtgcgagaggtgctggaattactctggccaggtcggg
tcattctctgaccatccaactctctgtggacgatgcttcaatgtcattgttgctaatcct
cccaagcctgcagttgcagccgcaatcagctga
DBGET
integrated database retrieval system
