Capsella rubella (pink shepherd's-purse): 17877256
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Entry
17877256 CDS
T02984
Name
(RefSeq) ABC transporter I family member 21 isoform X1
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17877256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17877256
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
17877256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
ORC-CDC6-like
SMC_N
AAA_23
AAA_15
AAA_28
AAA_25
NACHT
AAA
AAA_24
AAA_18
SRP54
DLIC
AAA_22
Zeta_toxin
PduV-EutP
AAA_30
AAA_5
AAA_33
SSB_1
Arf
AAA_14
AAA_16
Motif
Other DBs
NCBI-GeneID:
17877256
NCBI-ProteinID:
XP_006280931
UniProt:
R0GB33
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MADNGGGAIRVSGMQFSYELQDPIFFDFNLDLPSGSRCLLVGANGSGKTTLLKILAGKHM
VGGKNVVKVLDRSAFHDTELVCSGDLSYLGGSWSKAAGSAGEIPLQGDFSAEHMIFGVEG
IDPVRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARM
DLLEFFKEECEQRGATIVYATHIFDGLETWASHLAYIHGGELKLSAKLDEIKDLKTSPNL
LSVVETWLRSETKVEKKTKKKPVVTSPFMSSRQMAYYR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaatggcggtggtgcgattagggttagcggaatgcagttttcttacgaacta
caggatcctattttcttcgatttcaacctcgatcttccctctggatctcgttgccttttg
gttggtgctaatggatctgggaaaactacattgttgaagattctggctgggaagcatatg
gttggaggaaagaatgttgtaaaagttcttgatcgttcggcgtttcatgatacagagctt
gtttgtagtggtgatttgtcttaccttggaggatcatggagtaaagctgctggttctgct
ggtgagattcctcttcagggagatttctcagcagaacatatgatatttggagttgaaggg
atagatcctgtgagaagagagaagttgattgatcttcttgatattaatcttcaatggcgt
atgcataaggtttctgatgggcagagacgtcgagtgcaaatatgtatgggtcttttacat
ccattcaaggtgttattacttgatgaggttactgttgacctcgacgtcgttgctaggatg
gatttgttggaattctttaaagaagaatgtgaacagagaggagcaacaattgtatatgcg
actcatatttttgatggcctggagacatgggctagtcatttggcttacattcatggagga
gagctgaaactctcagccaaattagatgagatcaaggatctcaaaacctcaccaaatctg
ctctctgttgttgaaacttggctccggtctgaaaccaaagtcgagaagaagacgaagaag
aaacctgttgttacgtctccatttatgtcgtctagacaaatggcatattaccgatga
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