Capsella rubella (pink shepherd's-purse): 17878619
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Entry
17878619 CDS
T02984
Name
(RefSeq) sphingosine kinase 1 isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00600
Sphingolipid metabolism
crb01100
Metabolic pathways
crb04148
Efferocytosis
Module
crb_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
17878619
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
17878619
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
17878619
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
Motif
Other DBs
NCBI-GeneID:
17878619
NCBI-ProteinID:
XP_023635461
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MDRQTENDPPAIISDRVLVNGVVTPLALTADGEIRWMESGRRKSTAEKDVLSFVVEGNKV
RVKTLVERGGGICCEGNAGDYTRKDFVFEPLSDESRKLWCDKLHQHLDSLGRPKKLFVFV
NPFGGKKSARKIFVEEVKPLFEDANIQLEIQETKYQLHAKEIVRSMDVSKYDGIVCVSGD
GVLVEVVNGLLERADWRTALKLPIGMVPAGSGNGMIKSLLEPVGLPCSATSAAISIIRGR
TRSLDVATISQGTTKFFSVLMLAWGLVADIDIESEKFRWMGSARFDIYGLQRIICLRQYN
GRILFVPAPGFESYGQPASCSLDKEPSVSDKAIGYQGPDTRLEDLGWREMKGPFVSVWLH
NVPWGAENTLAAPDAKFSDGFLDLIVMKDCPKLALLSLMTKLNDGTHVQSPYVSYLKVKA
FVLEPGARLDEPDKEGIIDSDGEVLARGRRSYKCDQKALMSYSKLQISVDQGLATLYSPE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcagacggagaatgatcctccggcgataatctccgaccgagttctggtaaat
ggtgttgttacgccgttagctttgactgctgacggagagatacggtggatggaatctgga
cggcggaaatcgacggcggaaaaagatgtactgagtttcgtcgtggaaggtaacaaggtt
agagtaaagacattggtagagagaggaggaggaatttgctgcgaaggaaatgctggagat
tacacgaggaaggatttcgttttcgagcctctctctgatgaatctagaaagctttggtgc
gataagctccatcaacacctcgactctctcggtcggcccaagaaactgtttgtatttgtg
aatccgtttggcgggaagaaatcagcgaggaagatttttgtagaggaagtaaaaccattg
tttgaagatgctaatattcaacttgagattcaagaaaccaagtaccagttgcatgctaag
gaaattgttaggtccatggatgtatcaaaatacgatggtattgtttgtgttagtggtgat
ggtgtccttgttgaggttgtaaatggactgcttgaaagagcagactggagaactgcctta
aaattgccaataggaatggtccctgcaggaagtggtaatggcatgatcaaatcattgttg
gaaccggtagggcttccttgtagtgcaacaagtgccgctatttcaattattcgaggtcgt
acacgttctctagatgttgcaactatctcacaagggactaccaaattcttcagcgtcttg
atgcttgcttggggtttagtggctgatatagacatcgagtcagagaagttcagatggatg
ggtagtgctcgctttgatatctatggtcttcagaggataatatgcttaagacaatacaat
ggacggattctatttgtgccggcacctgggtttgagagctatggccaaccagccagttgc
agtttagataaagagccatctgttagtgataaggcaattggataccaaggtcctgatact
agacttgaagatctgggctggagagaaatgaaaggcccatttgtttcagtatggcttcat
aatgttccctggggtgctgagaacactttggctgctcctgacgcaaagttttctgatggg
ttcctggatttgattgtcatgaaagactgtcctaagcttgccttgctatcacttatgaca
aaattgaatgatggaacacatgttcagtcaccatatgtatcatatctgaaggtgaaggca
tttgtgctggagccaggtgcacgcctagacgaaccagacaaggaaggaatcatagattca
gatggagaggtattggcaagaggaagaagatcatacaaatgtgatcaaaaggctttgatg
tcttacagcaagcttcaaataagtgttgatcaaggtttagcaactctctactctcctgaa
taa
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