KEGG   Capsella rubella (pink shepherd's-purse): 17881315
Entry
17881315          CDS       T02984                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03420  Nucleotide excision repair
crb04120  Ubiquitin mediated proteolysis
crb04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    17881315
   04120 Ubiquitin mediated proteolysis
    17881315
  09124 Replication and repair
   03420 Nucleotide excision repair
    17881315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crb04121]
    17881315
   03400 DNA repair and recombination proteins [BR:crb03400]
    17881315
Enzymes [BR:crb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     17881315
Ubiquitin system [BR:crb04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   17881315
  Multi subunit type E3
   SCF complex
    Ring finger protein
     17881315
   Cul2 complex
     17881315
   Cul3 complex
     17881315
   Cul4 complex
     17881315
   Cul7 complex
     17881315
   Cul8 complex
     17881315
   Cul9 complex
     17881315
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      17881315
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      17881315
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 17881315
NCBI-ProteinID: XP_006288914
UniProt: R0FHI3
LinkDB
Position
Unknown
AA seq 116 aa
MATLDSDVPMLPAGGASSSASSSTKKPKRFEIKKWSAVSLWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 351 nt   +upstreamnt  +downstreamnt
atggcgacactcgactccgacgttcctatgcttcccgccggaggtgcctctagcagtgct
tcgtcttccaccaagaaacctaagcgattcgaaattaaaaagtggagcgccgtttctctc
tgggcttgggatatcgttgtcgacaactgtgcgatctgcagaaaccacatcatggatctc
tgcatcgagtgtcaagctaatcaggctagtgctaccagtgaagaatgtactgtcgcttgg
ggggtttgcaatcacgccttccactttcactgcatcagcagatggctaaagactcgtcaa
gtttgtccattagataacagtgagtgggagttccagaaatatggtcactaa

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