Capsella rubella (pink shepherd's-purse): 17881527
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Entry
17881527 CDS
T02984
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17881527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17881527
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
17881527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
Arf
AAA_23
ORC-CDC6-like
nSTAND3
AAA
AAA_30
Zeta_toxin
AAA_7
Motif
Other DBs
NCBI-GeneID:
17881527
NCBI-ProteinID:
XP_006288199
UniProt:
R0FFS8
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MAVTEEEKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGK
TTILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMD
ISAEKMIFGVAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLD
EITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPM
EKVKETSKKSLMRTVESWLRKERDEERKRRKERKANGLPEFESRAEESRVTGDPARMLNN
GWAAGRLHSTIAGGEDNFVLSSNRVLR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacggaagaagagaagcgaaactcaacggttgagatctccggattacgtttc
acgtatcctggaatcgacggtcatccacctccgggatcgaaaccacttatagaagatttc
tcgatcacgctcaattccagcgatcggtgtctcctcgtcggatctaatggcgcggggaaa
acgacgattctgaagatactgggagggaaacatatggtggagcctcacatggttagggtt
ctgggtcgctcggcgtttcacgataccggattgacgtcttccggtgatctctgctatctc
ggtggcgagtggaggcgtgatgttgcatttgcaggatttgaagttcctatacaaatggat
atttcagcggagaaaatgatatttggagtggctggtattgatccgcagagaagagatgag
ttgatcaaggtgttggatattgatatctcatggagattgcacaaggtatctgatggccaa
agaaggcgtgtccagatttgtatgggactcctcaagccattcaaggttctccttttggat
gaaatcactgttgaccttgacgttctcgcaagagccgaccttttgaaatttctaagaaag
gaatgtgaagaacgaggagcaaccataatctacgctactcatatatttgatggcctagag
gattggccaacacacattgtgtatgtagctaacgggaaattgcagttagcattgccaatg
gagaaagtgaaggagacaagcaagaagtcattgatgagaacagttgagagttggctcagg
aaagaaagagatgaagagaggaagagaagaaaagagaggaaagcaaatgggcttcccgaa
tttgaatcacgggctgaagaaagtcgtgtgactggtgatccagcacgaatgcttaacaat
ggctgggcagccgggagacttcactcaacgattgcaggcggcgaggataatttcgtctta
agctcaaacagagttctaagataa
DBGET
integrated database retrieval system
