Capsella rubella (pink shepherd's-purse): 17883497
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Entry
17883497 CDS
T02984
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
17883497
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crb01007
]
17883497
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17883497
Enzymes [BR:
crb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
17883497
Amino acid related enzymes [BR:
crb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
17883497
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
17883497
Prokaryotic type
Other AARSs
17883497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
17883497
NCBI-ProteinID:
XP_023636161
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MEDVCEGKEFSFPQQEENVLSYWTQIDAFKTQLKRTENLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMNGYHVTRRFGWDCHGLPVENEIDRKLNIKRRDEVIKMGIDKYNEE
CRSIVTRYVTEWEKVITRTGRWIDFRNDYKTMDLPFMESVWWVFAQLFDKNLVYRGFKVM
PYSTGCKTPLSNFEAGQNYKEVPDPEIMVTFPVIGDQDNAAFVAWTTTPWTLPSNLALCV
NAKFVYVKVRNKNTGKVYVVAESRLSALPTDKPKAKLSNGPAGDTKKANPKAKGAKPDSA
ADSFEVLEKFNGASLVGKKYEPLFDYFSDFSSEAFRVVADDYVTDDSGTGIVHCAPAFGE
DDYRVCLQNKIIKKGENLVVAVDDDGLFTERITHFSGRYVKDADKDIIEAVKAKGRLVKT
GSFTHSYPFCWRSDTPLIYRAVPSWFVRVEQMKEQLLESNGETHWVPDYVKDKRFHNWLE
NARDWAISRSRFWGTPLPIWISDDGEEVVVMDSVEKLEKLSGVKVFDLHRHHIDQITIPS
SRGPEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENKELFEKNFPGHFVAEGLDQTRGWF
YTLMVLSTALFGKPAFKNLICNGLVLAEDGKKMSKKLRNYPPPLEVIDEYGADAVRLYLI
NSPVVRAETLRFKKEGVLGVVKDVFLPWYNAYRFLVQNAKRVETEGGEPFVPTDMATLQS
ANVLDQWIHSATQSLVRFVRQEMDGYRLYTVVPELLKFLDNLTNIYVRFNRKRLKGRTGD
DDCHTALSTLFNVLLTSCKVMAPFTPFFTETLYQNLRKACKGSEESIHYCNIPPEEGTGE
ERIEQSVKRMMTIIDLARNIRERNKLPLKTPLKEMIVVHPDAQFLNDITGVLREYVLEEL
NVRSLVPCDDTLMYASEKAEPDFSKLGKRLGKSMGIVSKQVKEMSQKDILTFQKAKEVTI
ANHLLKLDDIKIVRVFKRPEGLKENEIDAAGDGDVLVVLDLRADESLVEAGVAREIVNRI
QKLRKKSGLEPTDCVEVYFESLDEDDSVAKQVINSQEQSIKDSIGSPLLLSTLMPSHAVI
IADETFTPKETSDESVQKAPKLSYKISLARPALKFNEEAVLALYSGDVKSATGLQTYLLS
RDHVNLKSEFQAGDGKITVSCIENLPAVTLVLGEHLHLSVSDDLLSKRNA
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgtatgcgaaggtaaagagttctcattccctcagcaagaagaaaatgtcctc
tcgtactggactcaaatcgatgctttcaagactcagctcaaacggactgagaatctcccg
gagtatattttctacgacggacctccgttcgccaccggacttcctcactacggacatatt
ctcgccggtacgattaaagatatcgtgacgaggtatcagtccatgaatggttaccatgtc
actcgtaggttcgggtgggattgtcatggcttacctgttgagaatgagattgatcggaag
ttgaatattaagaggagagatgaagttattaagatgggaattgataagtataatgaagag
tgtaggagtattgtgacccgttatgttactgagtgggagaaggttattactaggactggt
cgttggattgatttcaggaatgattataagactatggatttgccttttatggagagtgtt
tggtgggtttttgctcagctttttgataagaatcttgtgtacagaggcttcaaggttatg
ccgtatagtactggttgtaaaactcctttatctaattttgaagctggtcagaactacaag
gaagtgccagatccagaaatcatggtgactttcccagttattggagatcaagataatgct
gcttttgtggcatggactactactccgtggactcttccaagcaatcttgctttgtgtgtc
aatgcaaagtttgtctatgttaaggttcgtaataagaacactggaaaagtgtatgttgtt
gctgaatctcggttgtcagctcttcccactgataagcccaaagccaagttaagtaatgga
cctgctggtgataccaagaaagcaaaccctaaagcaaaaggtgctaaacctgacagtgca
gctgattcttttgaagttctggagaaatttaatggagcttccctggttgggaagaagtat
gaacctttgtttgattactttagcgatttctcaagtgaggcctttcgagtggttgcagat
gattatgtcactgatgacagtggtactggtattgtccactgtgctcctgcctttggtgaa
gatgattaccgtgtttgtcttcagaacaagattattaaaaagggtgaaaatttggttgtt
gctgttgatgacgatgggttgtttactgagagaattacgcacttcagtggccgttatgtt
aaagatgcagacaaggatataattgaagctgttaaggccaaaggcaggcttgttaaaaca
gggagctttactcactcatatccattttgctggagatcagacacccctcttatatataga
gcagttccgagttggtttgtgcgcgtggagcagatgaaagaacagttgttagaaagcaat
ggcgagacacattgggtacctgattatgtgaaggataaacgttttcacaattggctcgaa
aatgcaagggattgggctattagccgaagtagattttggggcacacctcttccgatatgg
atcagtgatgatggggaggaagttgtcgttatggattctgtggagaagcttgaaaagctc
tctggtgtcaaggtctttgatctgcatcgtcaccatattgatcaaattacaatcccatct
agtcgtggccctgaatttggtgtgctacgacgtgtagaagatgtttttgattgttggttt
gagagtgggtcaatgccttatgcatatatccattatccatttgaaaacaaggagctattt
gagaagaacttccctggtcattttgtggctgaagggcttgatcaaactcgtggatggttt
tatactcttatggtgttatctactgcattatttggaaaaccagcatttaaaaatctgatc
tgcaatggtcttgtgcttgctgaggatggaaaaaagatgagtaagaaattacggaattat
ccaccacctttggaagtcatagatgagtatggggctgatgctgtgcgattgtacctgata
aattctccggttgtacgtgctgagacattacgcttcaaaaaagaaggagtacttggtgtt
gtcaaagatgttttccttccatggtacaatgcatatcggttccttgttcagaatgcaaag
agagttgagactgaaggtggtgaaccctttgttcctactgatatggcaacgttacagtca
gcaaacgttcttgatcagtggattcactcagctacgcagagtcttgtccgttttgtccgt
caggagatggatggatatcggctttacactgtggttcctgagctcttgaagttccttgac
aatctcacgaacatatatgttagattcaaccgcaagaggttaaaaggccgtacaggagat
gatgattgtcacactgctctttcaactctatttaatgtgctacttacttcttgcaaagtg
atggccccttttacacctttcttcactgaaactttataccagaatctgcggaaagcatgt
aaaggatctgaagaaagcattcattactgcaatattccaccagaggaaggaacgggcgag
gagaggattgaacaaagtgttaaaaggatgatgacaatcattgatctagctcggaacatt
cgtgagcgtaacaaactacccttgaaaactcctctaaaggaaatgattgtggtccatccg
gatgcacaattcttgaatgacataactggagtactaagagagtatgtcttggaagaactt
aacgtaagatctcttgtaccatgtgatgatactctgatgtatgcatctgaaaaagcagaa
ccagatttcagtaaattgggaaagcgacttggaaagtcgatggggattgtttcaaagcaa
gttaaagaaatgtctcaaaaagatatcttaacatttcagaaggctaaagaagttactatt
gctaaccacttgctaaagctagacgatatcaagattgtcagggttttcaaacgcccagaa
ggtttgaaagagaatgaaattgatgcagctggagatggtgatgttttggttgttcttgat
ctacgagcagatgaatctttggttgaagcaggtgttgcccgagagattgtcaataggatc
cagaaactgcggaaaaagtcaggtctggaaccaacagactgtgtggaagtatactttgaa
tcattggacgaggatgactctgttgcgaaacaagttattaactctcaggaacaaagcatt
aaggattcaattggctcccctttgcttctgtccactttgatgccatcacatgcagtcata
atagccgatgagacatttaccccaaaagaaacatccgatgagagtgtccaaaaggctcca
aagttgtcatataagataagtttggccagaccagctttgaagttcaatgaagaggctgtt
cttgctttatactcaggagatgtgaaatctgcaaccgggctccaaacgtatttgctatcg
agggaccatgttaacttaaaatcagagttccaagctggagatgggaagattactgtaagc
tgcatcgaaaacttgcctgctgtgactctggttcttggtgaacatcttcatttgagtgtc
agcgacgacttgttaagcaagagaaatgcatga
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integrated database retrieval system
