Capsella rubella (pink shepherd's-purse): 17888247
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Entry
17888247 CDS
T02984
Name
(RefSeq) transcription factor PIF4 isoform X1
KO
K16189
phytochrome-interacting factor 4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17888247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17888247
Transcription factors [BR:
crb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
17888247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
17888247
NCBI-ProteinID:
XP_023641031
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MEHQGWSFEDNYSLSNNRRSISLCMLSVFLTRPQDELVELLWRDGKVVLQSQTHRDQTQT
QKQDHHEGALRSNTFLEDQETVSWIQYPPDEDPFETDDFSSHFFSTVDSIQRQTSETVKP
KPVPDPPQVMAKTKAGSDHPQVMPPPKFRLTDSSSGNMELGKEQYSVTTVGLSHCGSNPS
QSDLDVSMSHARSKNIKEKLYPNASSSSGGSSGCSFGKDIKEMASGGSITTDRKRKHIMD
TDESVSQSDATGNKSNQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTD
KASILDEAIDYLKSLQLQLQVMWMGSGMTAAPMMFPGVQPPPFIRQMQIPVPLPRFPVLG
RPAIQNNPGLDSQNPVQNQVFSDRFAKYIGGFPQIQQMQAASQAMEMMRFGSPAGQQSQQ
PSAPTKTTEGPRLDH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccagggttggagttttgaggataattatagtttgtccaataatagaagatcc
ataagtctatgcatgttgtctgtatttctgactaggccacaagatgaactagtggagttg
ttatggcgagatgggaaagtggttttgcagagccaaactcatagggaccaaacccagacc
cagaagcaagatcatcatgaaggagccctaagatccaacacttttcttgaagatcaagaa
actgtctcttggatccagtaccctccggatgaagacccattcgaaacagacgacttctcc
tcccatttcttctcaaccgtagactccatccagagacaaacctcagagacggttaagccc
aagcccgttcctgaccctcctcaagtcatggctaagactaaggccggttctgaccatcct
caagtcatgcctcctcctaagtttaggttaactgattcatcatcaggaaacatggaacta
ggaaaggaacagtactctgtgacgaccgttggacttagccattgcgggagtaacccatcc
cagagcgatctcgatgtctcaatgagtcatgctcggagcaaaaacataaaagaaaagctt
tatccgaacgcaagttcctcatcaggtggctcctctggttgcagctttggcaaagatatc
aaagaaatggctagtggaggaagcataacaacagaccgtaagagaaaacacataatggac
actgatgaatctgtgtctcaatcagatgcaaccggtaacaagtcgaaccaacgatcagga
tcaacacgaaggagtcgagcagctgaagttcataatctctccgaaaggaggaggagagat
aggatcaatgagagaatgaaggctttgcaagaacttatacctcactgcagtaaaactgat
aaagcttcgattttggacgaagccatagattatttgaaatcacttcagttacagcttcaa
gtgatgtggatggggagtggaatgacggcggctccgatgatgttccccggagtacagcct
ccgccgttcatacgtcagatgcagatccccgtaccgttacctcgatttccggttctgggt
aggcctgcaattcagaacaatcccggtttagatagtcagaacccggtacaaaaccaggtc
ttctctgaccggtttgctaagtacatcggtggcttcccacagattcaacagatgcaggcc
gcgtctcaggcgatggagatgatgagatttgggtcgccggcgggacagcaaagtcaacaa
ccgtctgcgccgaccaagaccaccgaaggtcctcgtttggaccactag
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