Capsella rubella (pink shepherd's-purse): 17892042
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Entry
17892042 CDS
T02984
Name
(RefSeq) LOW QUALITY PROTEIN: lactosylceramide 4-alpha-galactosyltransferase
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00601
Glycosphingolipid biosynthesis - lacto and neolacto series
crb00603
Glycosphingolipid biosynthesis - globo and isoglobo series
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
17892042
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
17892042
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crb01003
]
17892042
Enzymes [BR:
crb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
17892042
Glycosyltransferases [BR:
crb01003
]
Glycan extension
P blood group
17892042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
DUF6206
Motif
Other DBs
NCBI-GeneID:
17892042
NCBI-ProteinID:
XP_006299026
UniProt:
R0HQ85
LinkDB
All DBs
Position
Unknown
AA seq
265 aa
AA seq
DB search
MSCSIVYLCDQRALLTLISNSLDSPRGYTILLKXYTIKQNLIAVTLDIPFLVKDTPAEAW
LKRLKSGHMDPGSIPLFMNLSDLTRLAVLYKYGVYLDTDIIFLDDITRLRNAIGAQSIDP
KTKTWTRLNNAVMFFDINHPLMREFLQEYSTTFDENIWGHNSPYIVSRVIKRLGNKPGYN
FTIYPPDAFYPVNWIKIPKLFKKPANIREAQWVEKIVREISKGSYMIHLWNKITRKIKIE
EGSVMYSLISANCTICRNITNSHTL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgttccattgtctatttgtgcgaccagagagcattactcacattgatttctaac
tccttagactctcccagaggatacaccatccttcttaagngatacacaatcaaacaaaac
ctaattgctgtaaccctagatatcccgttccttgtcaaggacactcctgctgaagcttgg
ctgaaaaggctaaagagtggccacatggatcctggttctatccccttgttcatgaatctc
tctgacctaacaagactcgctgtactctacaaatacggagtctatcttgacactgacatc
atcttccttgatgatataacaagactaagaaacgccattggagctcagagtatcgatcca
aaaacaaagacatggacaagactaaacaacgcagtaatgttctttgacatcaaccatccg
cttatgagagagttcttgcaagagtactccacaactttcgacgagaacatatggggacac
aacagcccttacattgtctctagagttatcaagaggttaggaaacaaacctggatacaac
ttcactatctatccccctgatgctttctatccagtaaattggatcaaaatcccaaagctt
ttcaagaaacctgcaaatatcagagaagcacaatgggtagagaagattgtacgggagata
agcaaagggagttacatgattcatctatggaacaaaatcacaagaaagattaagattgaa
gaaggaagcgtcatgtacagtctcatctcagctaactgcacaatctgcagaaacatcaca
aactctcatactctctga
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