Capsella rubella (pink shepherd's-purse): 17893237
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Entry
17893237 CDS
T02984
Name
(RefSeq) protein SIEL
KO
K13141
integrator complex subunit 4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17893237
Spliceosome [BR:
crb03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
17893237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
PDS5
HEAT_2
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
17893237
NCBI-ProteinID:
XP_006296925
UniProt:
R0I0F7
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MEEGDSISAESLSLETLASIRSLIINADTSDSVISSVFDFLTGLLSRGDSAILHHALKLL
SDLASRRKELAPHIFESVFSNLLRLQNVAAEANHKRGAVESLVVLASLSERNHGIATELS
KIDGEVFASICLGAPISYRLWVLRNAERFNVPSSVLFTLYLGFTKDPYPYIREVALNGLT
NICKAGDFNHAHAVEGCYTRAVELLGDAEDSVRSSAVRAVSVWGKVMIASKDEEMNRREC
TDAVFLQLCSIVRDMSVDVRVEVFRAFGIIGTASEIIILQTLSKKVLGAGKGKKPQNHLS
NVSADVAAAAGVFIHGFEDEFYEVREAAVDSFHSLSVNSIKFPDEAVYLLMDMLYDDYMV
VRLKALEALHHIADLGNLKIQETYMPAFLDAIVDTSENIRFEARNILKLAKLPDLKLVNK
CVDDVLKSLEMYPQDEPDTLSALFHFGQNHANFLTSLVKRFSEKLGVASGNKSEFNSLHI
SASLMLIISAPLSNKLSIASIPPMAFSYSLAMLGKFSCGLQDIMDQDMLLAYLTHCAFLS
ASSGTEFNKGDIFCHAYRHGDADLAGNAVLLPSKDTTNESKYMASEAELEIRNQALKFVN
YILLKIKAAWLISQSGCSKEALQALRACKQELATLTPDSSISNGALQFMCQYIHVIELLA
QVWSHLEYSRHISTCIAVELDMLMEEVEIKLMEIRCRFTGLAMEVSLVMELVIFCCLLRL
YRFETCCRLSYIEKLTSTISQLELHHEQQCTNPSDFLTETKKSLQEIGGSANINLCRLLH
LIKIFSCFSPEQFTLSGNLQCVSVELEVPGNGPYSPISFLPGLPVAIQCEITLLNVPRDT
CLWLRISRSDETCQFVYVDPNLYNSDGREKRFMFSAVTYMTLRAVMFTLRVSIGIECMFE
EDVCYRKRHPGPKHPVAYLCKEREVHLNLVSRT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaggcgactcgatctctgctgaatcactctctctcgaaactttagcttctatt
agatcactcattatcaacgccgacacttccgactcggtaatttcctcggtgttcgatttc
cttactggtcttctgagtcgaggggactcggcgattcttcaccacgctctcaagctactc
tccgaccttgcctcccggcgaaaggaattagcaccacatatcttcgaatcggtcttttcc
aacttactccgccttcaaaacgtggccgcagaggcgaaccacaaacgcggcgccgtcgaa
tctcttgttgtgctggcttcgttatccgaaagaaaccatggcattgccactgagctttcc
aaaatcgacggcgaggtatttgcgtcgatttgcctcggagcacctatatcttatcggttg
tgggttcttaggaacgcggagaggttcaatgtcccgtcatccgtacttttcaccttgtat
ttagggtttaccaaggatccgtatccgtatatcagagaagtagctctgaatggactgact
aatatatgtaaggctggcgacttcaatcacgctcatgccgtagaaggttgctatactcgt
gctgttgagcttctaggcgatgctgaagatagcgtcagatcttctgcagttcgtgccgtc
agtgtgtggggcaaagtgatgattgcatccaaggacgaagagatgaacagaagagagtgt
acggatgctgtgtttctccagctttgttctattgtgagagatatgagtgtagacgtgagg
gttgaggtcttcagggcatttgggattataggaactgcatcagaaatcattatattgcaa
acactttctaaaaaagtattgggagccggaaaagggaagaaaccgcagaatcatctttcg
aatgtatcagctgatgtcgctgctgcagctggagttttcatccatggttttgaagatgaa
ttctacgaggtacgggaagctgcggttgactccttccactccctctcagtaaattctatc
aaattcccagatgaagctgtgtacctattgatggatatgctatacgatgattatatggtt
gtcaggttgaaagctttagaggcattgcatcatatagcagacttggggaaccttaagata
caggaaacatatatgcctgcctttttggatgctattgttgatacttctgagaacattagg
tttgaggctagaaacattcttaaactggcaaagctgcctgatctgaagctggtcaacaaa
tgtgttgatgatgtcctaaaaagtttagagatgtatccacaggacgaacctgataccttg
tctgccctgttccatttcggacaaaatcacgcaaatttcttaaccagtctggttaagaga
tttagtgaaaagttaggggtagcttccggaaataaatctgagttcaacagcctacatata
tctgcatctctgatgctgataatctcagcccctctctcaaacaaactaagcatcgcctcc
attccacccatggctttttcatattcacttgcaatgctggggaaattctcttgtggactt
caggatataatggatcaggatatgcttttggcttacttgactcattgcgcttttctttct
gcttcttcgggtacagaattcaacaaaggagatatattttgtcatgcatataggcacggt
gatgcagatcttgctggaaacgctgtcctactaccaagcaaagatacaactaatgagagt
aaatacatggcttccgaagcagaactggaaattagaaatcaagcactcaagtttgtgaac
tatatactgttgaaaataaaggctgcctggttgatatcacaatcagggtgctcgaaagaa
gcactccaagcgttgagggcttgcaaacaggagttagcaactttgacacccgattcttca
atctccaatggggcattacagtttatgtgtcagtatattcacgtaatagaacttctcgct
caggtatggtctcatttggaatactcaagacacatcagcacttgtatagctgtagaactg
gatatgctgatggaggaggtagagatcaaattgatggagataaggtgtagattcacaggc
ctggcgatggaggtgtcattagtaatggagctagtaattttttgttgcttgttaaggcta
tatagatttgagacttgctgccgccttagctacattgagaagctaacttcaactatatct
caattagagctccaccatgaacaacaatgcaccaacccatcagattttctaactgaaact
aagaagtcattgcaagagattgggggatctgctaatataaatttatgtagactgcttcat
ctcatcaagatattcagttgcttctctccggaacagtttacgttatctggtaatctgcag
tgtgtgagcgtggagctagaggttcctggtaatggtccttacagtcctatttcctttttg
cctggtcttccagtggctattcagtgtgagatcacgctgcttaatgtgccaagggatacc
tgtttgtggctgagaatatccagaagcgatgaaacttgccagtttgtgtatgtggatcca
aacctctacaatagtgatgggagagagaagaggttcatgtttagtgcagtaacttacatg
accctgagggctgttatgttcacattgcgggtctcaatagggatagagtgtatgtttgaa
gaagacgtttgttacagaaaacggcatcctggtcccaagcatccagtggcctatctgtgt
aaggaaagagaagttcacctcaaccttgtttcaagaacataa
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