KEGG   Capsella rubella (pink shepherd's-purse): 17894643
Entry
17894643          CDS       T02984                                 
Name
(RefSeq) sm-like protein LSM3B
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03018  RNA degradation
crb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    17894643
  09123 Folding, sorting and degradation
   03018 RNA degradation
    17894643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crb03019]
    17894643
   03041 Spliceosome [BR:crb03041]
    17894643
Messenger RNA biogenesis [BR:crb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     17894643
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     17894643
Spliceosome [BR:crb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    17894643
 Complex C
  U2 snRNP components
    17894643
SSDB
Motif
Pfam: LSM DUF150_C TIG_SUH
Other DBs
NCBI-GeneID: 17894643
NCBI-ProteinID: XP_006300355
UniProt: R0I9N6
LinkDB
Position
Unknown
AA seq 97 aa
MSGEEDATVREPLDLIRLSLDERIYVKLRSDRELRGKLHAFDQHLNMILGDVEETITTIE
IDDETYEEIVRTTKRKIEFLFVRGDGVILVAPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atgtccggcgaggaggacgccaccgtgagggagccactagatctgattcggctgagtctt
gacgagagaatctatgtcaagctccgttcagaccgcgagcttcgcggcaagcttcacgcg
tttgatcagcatttgaatatgattcttggtgatgttgaagaaactatcacaacaattgaa
atcgatgacgaaacatacgaagagattgttcggacaacaaagcggaagattgagtttctg
tttgtgagaggagatggagtaatattggtggctccaccactgaggacagcctga

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