Capsella rubella (pink shepherd's-purse): 17894643
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Entry
17894643 CDS
T02984
Name
(RefSeq) sm-like protein LSM3B
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17894643
09123 Folding, sorting and degradation
03018 RNA degradation
17894643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17894643
03041 Spliceosome [BR:
crb03041
]
17894643
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
17894643
mRNA degradation factors
5'-3' decay
Lsm complex
17894643
Spliceosome [BR:
crb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
17894643
Complex C
U2 snRNP components
17894643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
TIG_SUH
Motif
Other DBs
NCBI-GeneID:
17894643
NCBI-ProteinID:
XP_006300355
UniProt:
R0I9N6
LinkDB
All DBs
Position
Unknown
AA seq
97 aa
AA seq
DB search
MSGEEDATVREPLDLIRLSLDERIYVKLRSDRELRGKLHAFDQHLNMILGDVEETITTIE
IDDETYEEIVRTTKRKIEFLFVRGDGVILVAPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgaggaggacgccaccgtgagggagccactagatctgattcggctgagtctt
gacgagagaatctatgtcaagctccgttcagaccgcgagcttcgcggcaagcttcacgcg
tttgatcagcatttgaatatgattcttggtgatgttgaagaaactatcacaacaattgaa
atcgatgacgaaacatacgaagagattgttcggacaacaaagcggaagattgagtttctg
tttgtgagaggagatggagtaatattggtggctccaccactgaggacagcctga
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