Capsella rubella (pink shepherd's-purse): 17897011
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Entry
17897011 CDS
T02984
Name
(RefSeq) ATP-dependent helicase rhp16
KO
K15083
DNA repair protein RAD16
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17897011
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
17897011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-RING_5
zf-C3HC4_3
DEAD
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Prok-RING_4
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
17897011
NCBI-ProteinID:
XP_006306775
UniProt:
R0IQZ2
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MELRPRKKAIEVVDLEEEVGFNSDEEPYAITSDDDSVDPEFQGDEEVEEEEVDANEDLPI
PVPVLAPVPLANVNLPRGSKRKKPGANGEKVDLLWEIWEEDDNRWIDEHMTEDVDLDQQN
AVIAETAEPPSDLIMPLLRYQKEFLAWASKQEQSVAGGILADEMGMGKTIQAISLVLARR
EVDRAQFGEAVGCTLVLCPLVAVSQWLNEIVRFTSPGSTKVLIYHGAKREKNLKEFMNYD
FVLTTYSTVESEYRRYMMPPKVQCAYCSKSFYPKKLTIHLRYFCGPSAVKTAKQSKQKSK
KSTASFSKQVKEADAGEDNKTKKSKKKSKQTVEEDQLGSVHREKSLLHSIKWNRIILDEA
HYIKERSCNTAKAVFALEATYRWALSGTPLQNRVGELYSLIRFLQILPYSYYFCKDCDCR
ILDYVAHQRCPSCPHNTVRHFCWWNKNVAKPISVHGSLGLGKRAMILLKHKVLKDILLRR
TKLGRAADLALPPRIISLRRDALDVKEADYYESLYKDSQAEFNTYIQAGTLMNNYAHIFD
LLTRLRQAVDHPYLVVYSNSSGVNANLLDENKNEQECGLCHDPAEDYVVTSCAHVFCKAC
LIGFSTSLGKVTCPTCSKLLTVDWSTKADTDHQASKTTLKGFRSSSILNRIKLNDFQTST
KIEALREEIRFMIERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMSMAARDTA
INKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVEKQAQDRIHRIGQYKPI
RIVRFIIENTVEERILRLQKKKELVFEGTVGGSQEAIGKLTEADMRFLFTT
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggagctacgaccccgcaaaaaggcgattgaagttgtggatctcgaggaagaagttggc
ttcaactctgacgaagaaccttatgctattacttcagacgacgattcagtcgaccctgaa
tttcaaggtgacgaggaggtggaggaggaagaagtagatgctaatgaggatttaccaatt
cctgtacctgttcttgcccctgtgcctttggcaaatgtaaatttaccaagaggcagtaaa
aggaaaaaaccaggtgcaaacggagagaaagttgatctactgtgggagatatgggaagaa
gatgataacagatggattgatgaacatatgacagaggatgttgatttggatcagcagaat
gctgtgattgctgaaactgctgagcccccttcagatttgattatgccgctgttaaggtac
caaaaagaatttttggcttgggcatcaaaacaggaacaatcagttgccggaggcattctc
gcggatgagatgggaatgggaaaaactatacaagctatctctcttgttcttgctagacga
gaagttgacagggcacagtttggggaagcagtggggtgcacccttgtactttgtcctcta
gttgctgtttctcagtggttaaatgagattgttcggtttacgtccccgggaagcaccaag
gttcttatataccatggggcgaagagagagaagaatcttaaagaattcatgaactacgac
tttgttttgacaacatattccacagttgaaagtgagtataggagatatatgatgccgccc
aaggtgcagtgtgcatattgcagcaagtccttttatccaaagaagcttacaattcacctg
cggtatttttgtggtccttcggctgtcaaaacagcgaaacaatcaaagcagaaaagtaag
aagtctactgcttcattctcaaagcaagtgaaggaggctgatgcaggagaggataacaaa
acaaagaaatctaagaaaaagtccaaacaaacagtagaagaagatcagttaggttcagtt
cacagagagaagtctcttttgcactctattaagtggaataggatcattttggatgaggct
cattacatcaaagaaagaagttgcaacacagcaaaagctgtttttgctttggaggctacc
tacagatgggctttgagtggtacccctcttcagaatcgtgttggagagctttactccctg
atccgcttcttgcaaattctcccgtactcatattacttttgcaaagactgtgactgtaga
attcttgattacgttgcacatcaaagatgtcctagctgtcctcataatacagttcgacat
ttctgttggtggaacaagaatgtggccaagccaatatcggtacatggaagcttgggactg
ggaaagcgagccatgatattacttaaacacaaagttctgaaagacatccttctaagacgt
actaaattgggccgggcagctgatcttgctcttcctcctcgaattatctctttgaggcgg
gatgcactagatgtaaaagaggctgattactatgaatctctatacaaagacagccaggcg
gaatttaatacatatattcaggctggtacattgatgaataattatgcacatatatttgat
cttctcactcgtttgagacaggctgttgatcatccataccttgtggtgtattccaattct
agtggtgttaacgctaacttgcttgatgagaacaaaaatgagcaagaatgtggtctctgt
cacgaccctgctgaggactatgttgtgacttcttgtgcacatgtgttctgtaaagcttgt
ttgattggtttctccacgtccctgggaaaagtcacctgcccaacgtgctcaaaattactg
actgtcgattggagtaccaaagctgacacagaccatcaggcaagcaagacaacacttaaa
ggatttagatcctccagcattttaaatcggataaagctcaatgattttcagacaagtaca
aagattgaggctttgagagaagaaattagattcatgattgaaagagatgggtctgccaaa
gcaatagttttcagccagttcacatcatttttggaccttataaattatacccttgggaag
tgtggggttagctgtgttcaactggtgggaagcatgtccatggcagctagagatactgct
atcaataaattcaaagaagacccagattgcagagttttcttaatgagcttgaaagccgga
ggggttgctcttaatttaactgtagcttcacatgtatttatgatggacccgtggtggaat
ccagcggttgagaaacaagcacaagacagaattcataggatcggacagtacaagccaatc
aggattgtgagattcataatagagaacacagtggaggaaaggattttaaggcttcaaaag
aagaaggaacttgtgtttgaagggacggttggtggttctcaggaggccataggaaagctg
acggaggcagatatgaggtttctgtttacaacataa
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integrated database retrieval system
