KEGG   Capsella rubella (pink shepherd's-purse): 17897131
Entry
17897131          CDS       T02984                                 
Name
(RefSeq) switch 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crb03400]
    17897131
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    17897131
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C SWI2_SNF2 Glycos_transf_1
Other DBs
NCBI-GeneID: 17897131
NCBI-ProteinID: XP_006306750
UniProt: R0IQX3
LinkDB
Position
Unknown
AA seq 860 aa
MSLLHTFKETLKPCGSFPSSSSLRITSTQELEPSRKPPKSSLSQQLLRLDDSYFLPSKHE
SKISKPQVQGLDDGEDDHKRNIKFEEEEDEEEDDQTSIEFGRPGLNRAEFDYTGPYEPLV
LSSIGEIPIIKVPASINCRLLEHQREGIKFLYNLYKNNHGGILGDDMGLGKTIQTIAFLA
GVYGKDGEAGDTSVLESEKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILE
KLNARGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRI
GLTGTVMQNKISELFNLFDWVAPGSLGTREHFREFYDEPLKLGQRATAPERFVQIADTRK
QHLVSLLRKYLLRRTKDETIGHLMMGKEDNVVFCQMSQLQKRVYQRMLQLPEIQCLVNKD
NPCACGSPLKQYECCRRIVPDGPIWSYLHRDNPDGCDSCPFCLVLPCLLKLQQISNHLEL
IKPNPKDEPEKQKKDAEFVSSVFGTDIDLVGGISASKSFMDLSDVKHCGKMRALEKLMAS
WISKGDKILLFSYSVRMLNILEKFLIRKGYSFSRLDGSTPTNLRQSLVDDFNASPSKQVF
LISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEE
LIYTRQVYKQQLSNIAVAGKMETRYFEGVQDCKEFQGELFGISNLFRDLSDKLFTSDIVE
NKRSLLEAGVSEDKKEEEVSCSFKPETEKPILKDLGILYAHRNEDIINGGGETITATSQR
LNRDSDNDENLVCEDRKKKKRKGCSEEEDMSSSNREQKREKYKMLAKFKGMEILDFSRWV
LSASPVDREKLLRDFLERVK
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgtcgttgttacacactttcaaagagaccttgaagccctgtggtagtttcccatcatcg
tcatcgttgcgaatcacatcgacccaagaattggaaccgtcgagaaagcctcccaaatcg
tctctctcacagcagctactgcgcctcgatgattcctactttctaccctcgaagcacgaa
tctaaaatctctaaaccccaggtccaaggtcttgacgatggcgaagatgatcacaaaaga
aatatcaagtttgaagaagaagaggatgaagaagaagacgatcagacatcgattgaattt
ggcagacccggattaaaccgggctgaatttgactataccgggccttatgaaccacttgtg
ctgtcatcaatcggagaaattccgatcataaaggtaccggcttctatcaactgtagattg
ctggaacatcagcgagagggaatcaagtttctgtataatctctataaaaacaaccatggt
ggcattcttggcgatgacatgggattaggcaagaccattcagactattgcatttcttgct
ggagtatatggaaaagacggtgaagctggtgatacttctgttttggagtctgaaaagggt
cctgtactaattatctgcccatcttcgatcatccacaactgggagagtgagttttctcga
tgggcgagcttcttcaaggtttctgtgtaccacggatcaaaccgagatatgattctggag
aaactcaatgcgcggggtgttgaggtacttgtaaccagctttgatacttttcgaatccaa
ggccccgttttgtctgggattaactgggagatagtgattgctgatgaggctcatcggtta
aagaatgaaaaatcgaaactttatgaggcatgccttgagatcaagacgaagaaaaggatt
ggtcttacgggtacagtgatgcagaacaagatcagtgagttattcaacctttttgactgg
gtagcgccagggtcgctaggcactcgtgaacatttccgagaattctatgacgaaccgctt
aagcttgggcagagagcaactgctccagaaaggtttgtccagattgcagatacgaggaaa
cagcatttggtcagccttctgcgtaagtatttgttgaggaggacaaaggacgagacaatt
ggacatctgatgatggggaaagaagataatgtagtcttctgtcaaatgagtcaattacag
aaacgtgtgtatcaaagaatgctgcagctccccgaaattcagtgccttgtgaataaggac
aatccatgcgcttgtggaagcccgcttaagcaatatgagtgctgcagaaggattgttcct
gatggacctatctggagttaccttcatagagacaaccctgacggctgtgattcttgtcct
ttctgcttggtgcttccatgccttttgaaacttcagcagataagcaatcatttggagctt
attaaaccaaacccaaaagatgagccagaaaaacagaagaaagacgcagagtttgtatct
tcagtgtttgggacagatattgatctagtaggaggaatttccgccagcaagagcttcatg
gaccttagtgatgttaaacattgtgggaaaatgagagctttggagaagttgatggcttct
tggatttcaaagggtgataagatacttctattcagttactctgtcaggatgcttaacata
ctggagaagtttcttattagaaaaggttatagcttttcaagactagatggttccacccca
actaatctgcgacaatctcttgtagatgatttcaatgcgagtcccagcaaacaggttttt
ctgatatcaactaaagcgggtgggttgggactaaaccttgtgagcgcgaatcgtgtggtt
atatttgacccaaactggaacccgtctcatgacttgcaagcgcaagatagatcatttcga
tacggacagaaacgtcatgtggttgtttttcgtttgttgagtgctggttcccttgaggaa
ttaatttatacaagacaagtatataaacaacagctttcaaacattgcggttgcagggaaa
atggagacaaggtactttgaaggcgtccaggactgtaaagagtttcaaggcgagctattc
gggatttcaaatctgttccgtgatctttctgataagctcttcactagcgatattgttgag
aataagagatcattgcttgaggcaggtgtttcagaagataaaaaagaagaagaggtttcg
tgctcttttaaaccggaaacagagaaacctatcctgaaggacttgggcattctgtatgca
catcgaaatgaagacatcatcaacggtggaggagagacaataacagcaacatctcagagg
ttaaatagagacagtgacaatgatgagaacttagtgtgtgaagatcgaaagaagaagaag
agaaaaggttgtagtgaagaggaggatatgtcttcttcaaacagggaacaaaaaagagag
aagtacaagatgttagccaagtttaaaggcatggagattctggattttagtagatgggta
ctgtcagcttccccagttgacagagagaagttacttcgagactttttagaaagagtcaag
taa

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