Capsella rubella (pink shepherd's-purse): 17897398
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Entry
17897398 CDS
T02984
Name
(RefSeq) ABC transporter I family member 19
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17897398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17897398
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
17897398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
ORC-CDC6-like
AAA_28
NACHT
AAA
AAA_15
AAA_5
AAA_23
AAA_18
SRP54
SMC_N
AAA_25
AAA_30
PriX
PduV-EutP
AAA_33
Zeta_toxin
AAA_24
AAA_22
AAA_14
Arf
AAA_16
AAA_13
Motif
Other DBs
NCBI-GeneID:
17897398
NCBI-ProteinID:
XP_006305479
UniProt:
R0GR32
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MAEKDATASGGDAIRVSGMQFAYEVEDPIFFDFNLDLPVGSRCLLVGANGSGKTTLLKIL
AGKHMVGGKNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAGEVPLQGDFSAEHMI
FGVEGIDPVRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLD
VVARMDLLEFFIEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNRLSKMTDIDELK
TSPNLLSVVESWLRSEIKLVKKKKIKPVAAWKPSPFDNSPFRSSRHMAYY
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaagatgcgacggcgagtggcggtgacgccattagagttagtggtatgcag
ttcgcatacgaagttgaggatcctatattcttcgacttcaacctcgatcttccagttggc
tctcgctgccttctcgttggtgctaatggatctggcaagacaaccttactgaagattttg
gctggaaaacatatggtgggaggaaaaaacgttgtacaagttcttagccgctcagctttc
catgatactcaacttgtttgtagtggtgacttgtcttaccttggaggatcatggagtaaa
accgttggttcagctggtgaagttcctctccaaggagacttttcagcagaacatatgata
tttggagttgaaggaattgatcccgtacgaagagaaaaattaatcgatcttcttgatatt
aatcttcaatggcgtatgcataaggtttctgatgggcagaaacggcgagtgcagatatgc
atgggactcttacatccattcaaggtattattactcgatgaggtcactgtggacctagac
gtcgttgcaaggatggatttactggaattcttcattgaagaatgtgatcagagaggagct
acaattgtatatgcaactcacatattcgacgggctagagacatgggcgacacatttggcc
tatattcaggacggtgagctaaatcgtttatcaaaaatgacagatattgacgagctgaaa
acttcacccaacctcctctccgtggtagaatcttggcttcgttctgaaatcaaactcgtg
aagaagaagaagataaagcctgtggcagcatggaaaccatctccattcgataactctcct
ttcaggtcatcaagacacatggcttattactga
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