Capsella rubella (pink shepherd's-purse): 17898321
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Entry
17898321 CDS
T02984
Name
(RefSeq) DNA polymerase kappa isoform X2
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
17898321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17898321
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
17898321
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
17898321
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
17898321
NCBI-ProteinID:
XP_006303846
UniProt:
R0I3A6
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MDNGESSSTNNSSRPWESYNTVFTNAKAGMEGVDKEKVQRIVYEMSKGSKYFQNEERKDA
LMKQKIEHMRDRCAKLSSSVLSTYQKVVDRRILELEASRDLSRIWLHVDMDAFYAAVETL
SDPSLKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYS
DLTRKVFGSYDPHFIAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVYSETGLTCSAGV
AANRLLAKVCSDINKPNGQFVLQNDRSTVMTFISSLPVRKIGGIGKVTEHILNDALGIKT
CEEMVQKGSLLYALFSQSSADFFLSVGLGLGGTDTPQVRSRKSISSERTFSATGDERLLY
SKLAEIAEMLSQDMKKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLL
KAELPVSVRLIGLRMSQFMEEVRNSDPSQGTITKFIVQKDSSRHDLDDNESFDIDASKNF
LSNNESRSLSCGSRETSYAHLKHVEYDERSDIHSEKVIPNQKCMKKEEMPQVLEGDALLI
KHREGKPDTNHSMNDNPNAQNTESVSVFPQTEPLFWVDGYKCILCGIELPPSFVEERQEH
SDFHLAQRLQSEESGSSSSTTPSKRRILGKEKANSKPKKQKRDQKDSSKHIPIHTFFIKS
NQNLNETQKK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggataatggcgaatcatcatcaaccaacaattcgtcgcgtccatgggaatcttacaac
accgtcttcaccaacgctaaagccggaatggagggagttgataaggagaaagtccagagg
attgtctatgaaatgagtaaagggtccaaatattttcagaatgaggaacgtaaagatgct
cttatgaaacaaaagattgagcatatgcgtgaccgatgtgcaaagctttcttcttctgtt
ttatctacttatcaaaaggtcgttgatagaaggatcttagagctagaagcttcacgtgac
ctttccaggatttggctgcatgttgatatggatgctttttatgctgctgttgaaactttg
agtgatccttcgctcaagggaaagccgatggctgttggaggattgtccatgatctctacc
gctaattatgaggcaaggaagtttggggtccgtgcagctatgcctggcttcattgctcgt
aaattgtgtccagacttgatatttgttcctgtagatttcaccaagtatactcactatagt
gacttaacaagaaaagtttttgggagctatgatcctcacttcattgctggaagtttggat
gaagcctaccttgacataactgaggtttgtcgagaaagaggtctttcaggtggagaaatt
gcagaggagcttagatcttctgtttattccgagactggattgacatgcagtgctggagta
gcggcaaaccgcttgcttgctaaggtttgctcagacattaataagcctaatggacagttt
gttctacaaaatgaccgatcaactgtcatgacattcatatcttcccttcccgtgagaaag
atcggtggaattggtaaggttactgaacatattctgaacgatgctttgggaattaaaaca
tgtgaggagatggtgcagaagggatcccttctctacgctctgttttctcagtcgtcagca
gacttttttttgtcggttggactggggcttggaggaacagacacccctcaggttaggtct
cgtaaaagtattagcagtgagaggacattttctgcaacaggagatgaaagattgctatat
tcgaagttggctgaaattgcagaaatgctatctcaggacatgaaaaaggagggtctaaca
gcaaggacattgacacttaaactgaaaactgcctcctttgagatcaggagcagagctgtt
agtctgcagaggtacacatgttcaagtgatgatatactaaagcatgctacaaagctgctg
aaggcggaacttcctgtttccgtaaggttgatagggttgcgcatgtctcagttcatggaa
gaagtccgcaattctgatccttcacaaggaactatcacaaagttcatcgttcaaaaggat
tcctcaagacatgatctggatgataatgagtcatttgacatagatgctagtaaaaatttc
ctaagtaacaacgagagccggagtttatcctgtggttcccgtgagacaagctatgcccat
cttaagcatgtcgaatatgacgaacggtctgatatacattctgaaaaggtaattccaaat
caaaaatgtatgaaaaaggaagaaatgccgcaagtattggaaggagatgctcttctcata
aaacacagggaggggaaaccagatactaatcactcaatgaatgataatcctaatgcacaa
aacaccgaatcagtttcagtatttcctcaaacagagccgttattttgggttgatggctac
aaatgcatcttgtgtgggatagagttaccaccatcttttgttgaggaacgacaagaacac
tctgatttccatcttgctcagagacttcaaagcgaagaatctggctctagctcttccacg
acaccttcaaaacgaaggattctcggaaaggaaaaggcaaattccaagccaaagaagcag
aaacgagatcaaaaggacagtagcaaacacatcccaatacacacgttcttcataaagagc
aaccaaaacttgaacgaaacacagaagaaatga
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