Corynebacterium resistens: CRES_1395
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Entry
CRES_1395 CDS
T01538
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
crd
Corynebacterium resistens
Pathway
crd03030
DNA replication
crd03410
Base excision repair
crd03420
Nucleotide excision repair
crd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CRES_1395 (ligA)
03410 Base excision repair
CRES_1395 (ligA)
03420 Nucleotide excision repair
CRES_1395 (ligA)
03430 Mismatch repair
CRES_1395 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crd03032
]
CRES_1395 (ligA)
03400 DNA repair and recombination proteins [BR:
crd03400
]
CRES_1395 (ligA)
Enzymes [BR:
crd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CRES_1395 (ligA)
DNA replication proteins [BR:
crd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CRES_1395 (ligA)
DNA repair and recombination proteins [BR:
crd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CRES_1395 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRES_1395 (ligA)
MMR (mismatch excision repair)
DNA ligase
CRES_1395 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CRES_1395 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
Nlig-Ia
HHH
BRCT_2
HHH_8
Surface_antigen
Motif
Other DBs
NCBI-ProteinID:
AEI09750
UniProt:
F8DZ64
LinkDB
All DBs
Position
1690237..1692279
Genome browser
AA seq
680 aa
AA seq
DB search
MTTSENRWQELADEVRLHRERYYYGDPTISDADFDALLAQLRTLEDEHPELVTGPSPLTE
VAPTPPTSSPFRNVDHRERMLSLDNVFDGAQLESWLERTPADTYLTELKIDGASINLLYV
NGELELALTRGDGTTGEDITHNAKTLDDIPQKLKGTEEFPVPELVEVRGEVFITVEDFAT
MNAQRQAEGLKMFANPRNAAAGAMRQKNAEDTAKRPLRLICHGIGAREGFTPQSQHEAYQ
AIAAWGLPVSPYTKQVHSAKEVVEQVTYWGEHRHDAAHEMDGVVIKVDSLSEQLELGATS
RAPRWAIAYKYPPEEAVTTLRNIRIGIGRTGRATPYAVMEPKYVAGSTVTMATLHNPTEA
HRKGVMLGDRIMIRKAGEVIPEVLGPVEDERTGKERPFIYSSICPECGTVLAPSKEGDAD
WRCPNTRSCPGQLHTRLTYLSGRGAFDIDALGERAAYDLINSGVLSDESGLFNLKKQDLE
RTTAYSTKAGSLNKAGETLLEKLESAKQVDLWRVIVALSIRHAGPTAAKALAAHYHSIAA
IQGASVEEMSTIEGVGEIIAQSIADWFTVDWHRNIVNSWSTAGVRMEEEVPEKSEEDLAQ
AKLLDGLTIVVTGTLENFDRDGAKEAIEARGGKAAGSVSKKTSFLVAGEKAGSKLTKAED
LGVPVLNEQQFVELLEKGSL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgactacctccgaaaaccgctggcaagaattagccgatgaagtgcgcttgcaccgcgag
cgctactactacggcgatcccactatttccgacgccgacttcgatgcgttattagcccag
cttcggactctcgaagatgagcatccagagctcgtgacaggccccagcccgctgacggag
gttgcccctactccgcccacttcgagtccattccgcaatgtcgaccaccgcgagcgcatg
ctcagcctcgacaatgtcttcgatggtgcacaacttgagtcttggcttgagcgcaccccg
gcggatacctacctcacggagttgaagattgatggtgcctccatcaatcttctttacgtc
aacggtgaactggagcttgctctgacccgcggcgacggcacgacgggcgaggacatcacg
cacaatgcgaaaactctcgacgatatcccgcaaaagctgaagggaacggaggagtttccg
gttccggagcttgtggaagtccgtggcgaggttttcattactgttgaggatttcgcgacg
atgaacgcccaacggcaggccgaggggctgaagatgttcgctaatccccgcaacgcagcc
gccggcgctatgcgtcaaaaaaatgccgaagacacagcgaagcgaccgctgcgcctgatt
tgccacggtattggcgcacgcgaaggtttcactccgcaatcgcagcacgaggcataccaa
gcaattgcggcatggggactgccagtaagcccatatacgaaacaggtgcattcggcgaaa
gaagttgtcgagcaggtgacgtactggggtgaacaccgccatgacgctgcgcatgagatg
gacggagtggtcatcaaggtcgattccctctccgaacagttggagctcggggccaccagc
agagcgccacgctgggcaatcgcctacaaatatccaccagaagaagctgtaaccacactg
cgcaacattcgcatcggcatcggccgcaccggccgggcaacaccatacgcggtcatggag
ccgaagtacgtggcaggttccacagttacgatggccaccttgcacaaccccacggaggca
caccgcaaaggcgtgatgctgggcgatcgcatcatgattcgcaaggctggcgaagtcatc
cccgaggtactcggtccagttgaggacgagcgcaccggcaaagaacgaccgttcatttac
tccagcatctgccccgagtgtggcacggttttggctccttccaaggagggcgacgccgat
tggcgctgccccaatacccgctcttgcccaggacagctgcacacgcgcctgacgtacctg
tccggtcgcggcgccttcgatatcgatgctttgggcgaacgcgcggcctacgacttgatt
aattccggtgtactttctgatgaatccgggctcttcaacctcaaaaagcaagatctcgaa
cgaaccactgcttattccactaaagccggatccttgaataaggcaggtgaaacgcttcta
gagaagctggagagcgccaaacaggttgatctgtggcgcgtgatcgtggcgctttcgatt
cggcacgcgggcccgactgccgcgaaagcgctagctgcgcattaccactccatcgcggcg
attcaaggggccagcgtggaagagatgtccaccatcgagggggtgggcgagattatcgcg
caatctatcgcggactggtttactgtcgactggcaccgcaacatcgtgaactcttggtcg
acagcgggtgttcgtatggaagaggaagtcccagagaagtcagaagaagatttggcccaa
gcaaagctcttggacggcctcacaatcgttgtgacgggcacgctggagaatttcgatcgt
gatggcgcgaaggaagccattgaagctcggggcgggaaagccgcgggcagcgtatctaaa
aaaaccagcttcctcgttgcaggagagaaagctggttcgaaactaactaaggccgaggat
ttgggagtccccgtccttaatgagcagcagttcgtggaactgctcgaaaagggttcactc
taa
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