Chlamydomonas reinhardtii: CHLRE_12g543450v5
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Entry
CHLRE_12g543450v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03420
Nucleotide excision repair
cre04120
Ubiquitin mediated proteolysis
cre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CHLRE_12g543450v5
04120 Ubiquitin mediated proteolysis
CHLRE_12g543450v5
09124 Replication and repair
03420 Nucleotide excision repair
CHLRE_12g543450v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cre04121
]
CHLRE_12g543450v5
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_12g543450v5
Enzymes [BR:
cre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
CHLRE_12g543450v5
Ubiquitin system [BR:
cre04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
CHLRE_12g543450v5
Multi subunit type E3
SCF complex
Ring finger protein
CHLRE_12g543450v5
Cul2 complex
CHLRE_12g543450v5
Cul3 complex
CHLRE_12g543450v5
Cul4 complex
CHLRE_12g543450v5
Cul7 complex
CHLRE_12g543450v5
Cul8 complex
CHLRE_12g543450v5
Cul9 complex
CHLRE_12g543450v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
CHLRE_12g543450v5
TCR (transcription coupled repair) factors
Cul4-CSA complex
CHLRE_12g543450v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_Vps41
zf-C3HC4_3
zf-RING_16
zf-Nse
Rtf2
Prok-RING_4
PHD_NSD
zf-C3HC4_4
zf-RING_11
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
5719541
NCBI-ProteinID:
XP_001694081
UniProt:
A8IY22
LinkDB
All DBs
Position
12:9024656..9026095
Genome browser
AA seq
130 aa
AA seq
DB search
MSDNEMEVEEQQEQEEQQAGPSKRGNKSGKRFEIKKWNAVAMWSWAICTDTCAICRNNLY
EPSIEYQANPTGDPDHPGLSIAWGCCGHVFHLDCIQRWLKTRSACPLCNKEWEFAKIEKI
LPGGGMVGLE
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaacgaaatggaagtcgaggagcagcaggagcaggaggagcagcaggcaggg
cccagcaagcgcggcaacaagtcggggaagcggttcgagattaagaagtggaatgcagtg
gcgatgtggagctgggccatttgcaccgacacctgcgccatttgccgcaacaacctttac
gagcccagcatcgagtaccaggcgaaccccacgggggacccagatcacccgggcctgtcc
attgcctgggggtgctgcgggcacgtcttccacctggactgcattcagcgctggcttaaa
acccgtagcgcctgcccactgtgcaacaaggagtgggagtttgccaagattgagaagatc
ctgccgggcggcggcatggtgggcctggagtaa
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integrated database retrieval system