KEGG   Chlamydomonas reinhardtii: CHLRE_12g543450v5
Entry
CHLRE_12g543450v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03420  Nucleotide excision repair
cre04120  Ubiquitin mediated proteolysis
cre04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CHLRE_12g543450v5
   04120 Ubiquitin mediated proteolysis
    CHLRE_12g543450v5
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHLRE_12g543450v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cre04121]
    CHLRE_12g543450v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_12g543450v5
Enzymes [BR:cre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     CHLRE_12g543450v5
Ubiquitin system [BR:cre04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   CHLRE_12g543450v5
  Multi subunit type E3
   SCF complex
    Ring finger protein
     CHLRE_12g543450v5
   Cul2 complex
     CHLRE_12g543450v5
   Cul3 complex
     CHLRE_12g543450v5
   Cul4 complex
     CHLRE_12g543450v5
   Cul7 complex
     CHLRE_12g543450v5
   Cul8 complex
     CHLRE_12g543450v5
   Cul9 complex
     CHLRE_12g543450v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      CHLRE_12g543450v5
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      CHLRE_12g543450v5
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-RING_Vps41 zf-C3HC4_3 zf-RING_16 zf-Nse Rtf2 Prok-RING_4 PHD_NSD zf-C3HC4_4 zf-RING_11 zf_RING_Vps8
Other DBs
NCBI-GeneID: 5719541
NCBI-ProteinID: XP_001694081
UniProt: A8IY22
LinkDB
Position
12:9024656..9026095
AA seq 130 aa
MSDNEMEVEEQQEQEEQQAGPSKRGNKSGKRFEIKKWNAVAMWSWAICTDTCAICRNNLY
EPSIEYQANPTGDPDHPGLSIAWGCCGHVFHLDCIQRWLKTRSACPLCNKEWEFAKIEKI
LPGGGMVGLE
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtcggacaacgaaatggaagtcgaggagcagcaggagcaggaggagcagcaggcaggg
cccagcaagcgcggcaacaagtcggggaagcggttcgagattaagaagtggaatgcagtg
gcgatgtggagctgggccatttgcaccgacacctgcgccatttgccgcaacaacctttac
gagcccagcatcgagtaccaggcgaaccccacgggggacccagatcacccgggcctgtcc
attgcctgggggtgctgcgggcacgtcttccacctggactgcattcagcgctggcttaaa
acccgtagcgcctgcccactgtgcaacaaggagtgggagtttgccaagattgagaagatc
ctgccgggcggcggcatggtgggcctggagtaa

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