Chlamydomonas reinhardtii: CHLRE_13g580300v5
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Entry
CHLRE_13g580300v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLRE_13g580300v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_13g580300v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CHLRE_13g580300v5
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_25
AAA_29
AAA_28
TsaE
nSTAND_NTPase5
nSTAND3
AAA
AAA_5
PduV-EutP
NACHT
AAA_23
AAA_16
SRP54
Zeta_toxin
AAA_30
ATP-synt_ab
AAA_22
Arf
DEAD
AAA_15
AAA_19
Motif
Other DBs
NCBI-GeneID:
5719310
NCBI-ProteinID:
XP_001693808
UniProt:
A8HTT9
LinkDB
All DBs
Position
13:complement(2505919..2508667)
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AA seq
310 aa
AA seq
DB search
MTVVAENAPSTSGNEAIVLNSTTFAYPGCDPFIKGCNLNIPRGSRCLLIGANGAGKTTLL
QIVAGKYMVAKDSVRVLTRSPFHDLQLTCTGQLSYLGTSWRKDVAFAGYGVPLQGDISAG
KMIFGVEGVEPARRSRLIEMLDIDLYQRITTMSDGQKRRVQICMGLLKPYDVLLLDEITV
DLDVVGRLRLLDFFKQESDERGATILYATHIFDGLEGWISHIAYMEDGAMVKGGDIASVR
EVAELAAQASAAPGKAPRKLLHVVEDWLRSERDARHARAAAAGTTAADLETAVKPQRTPF
MPSKHLAFFR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgtagctgaaaatgcaccgtcaacgagcgggaacgaggccatagtgctcaac
tccacaacattcgcgtaccccggctgtgacccctttatcaagggctgcaacctgaacatt
cctcgtggtagccgctgcttgctcatcggcgcgaatggcgccggaaagaccacgctactg
caaatcgtcgcgggcaaatacatggtcgctaaagactccgtgcgggtgctcactcgctcg
ccattccatgaccttcaacttacatgcaccggtcagctgagctacctggggacgtcgtgg
cgcaaggacgtggcgtttgccggctatggagtgccgctgcagggcgacatcagcgcgggc
aagatgatcttcggcgttgagggcgtggaacccgcccgccgctcccggctgatcgagatg
ctggacattgacctctaccagcgcatcaccacaatgtcggacggccagaagcgccgcgtg
cagatctgcatgggactgctcaagccctacgacgtgctgctgctggacgagatcacagtg
gacctagatgtggtgggccgcctgcgcctgctggacttcttcaagcaggagagcgacgag
cgcggcgccaccatcctgtacgccacccacatcttcgacggcctggagggctggatcagc
cacatcgcctacatggaggacggggccatggtcaagggcggagacatcgccagcgtgcgc
gaggtggcggagctggcggcgcaggcgtccgccgcgcccggcaaggcgccgcgcaagctg
ctgcatgtggtggaggactggctgcggtcggagcgggatgcgcggcacgcacgcgccgcg
gccgccggcaccaccgccgccgacctggagacggcggtgaagccgcagcgcacgccattc
atgccgtccaagcatttggcctttttccggtaa
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