KEGG   Chlamydomonas reinhardtii: CHLRE_17g731050v5
Entry
CHLRE_17g731050v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLRE_17g731050v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_17g731050v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CHLRE_17g731050v5
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_23 TsaE AAA_30 AAA_25 AAA_24
Other DBs
NCBI-GeneID: 5727054
NCBI-ProteinID: XP_001701540
UniProt: A0A2K3CQY9
LinkDB
Position
17:4333984..4338635
AA seq 382 aa
MPVPVSVTNPNGKGLVAAAPSSLPTEGPFARLKAAAAANTANGSANGAANGTSQAAPMEV
ERPVQQEITEQPVASTSAPASIEVRGLNFAYPGLDGRPIPGVPPLLRDLTFSLPPGSTCL
LLGANGAGKTTFMKILGGKHMIPEEAVRILGRAPFHDTGLTTSGDLSYIGGNWQRDIAFA
GTSIPLTGDFPAQRMIDSIAGVDPERKKRLIKVLDIDPSWRMHQVSDGQRRRVQICVGLL
KPFKVLLLDEITVDLDVLGRADLMRFLQEECSSRGASIIYATHIFDGLEFWPSHVAYLAG
GRLALFKEAKHLPELAEGRLLSMVYGLLNADREAQIKVRGPVSTEWDPSREGEVGNFSYA
FNNGWVPGTMNTSLSTNAVMRN
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgcctgttcctgttagcgtaactaacccgaacgggaaaggcctggtcgctgcggcgcca
tcgtcgctcccaaccgaggggcccttcgctcgcctgaaggccgcagccgcagcaaacact
gccaacggctctgcgaatggcgcagctaatggtacaagtcaagcggcgcccatggaggtg
gagcgaccggtgcaacaggaaatcacggagcagcctgtggcgagcaccagcgctcccgcc
agcatcgaagtgcgtggcctcaacttcgcctaccctggcctcgacggccgccctattcct
ggtgtgccgccgctgctgcgtgacctgaccttctcgttgccgcctgggtccacgtgcctg
ctgctgggagccaacggcgccggcaagacgacgttcatgaagatcctgggtggcaagcac
atgatccccgaggaggctgtgcgcatcctgggccgcgcgcccttccacgacaccggcctc
accacatcgggtgacctctcctacattggcggcaactggcagcgcgacatcgcgttcgcc
ggcacctccatcccgctcaccggcgacttcccggctcagcgcatgatcgactccatcgcg
ggcgtggaccccgagcgcaagaagcggttgataaaggttctggacatcgaccccagctgg
cgtatgcaccaggtgtcggacgggcagcgccgccgtgtgcagatctgtgtgggcctgctg
aagcccttcaaggtgctgctgcttgatgagatcacagtggacctggacgtgttgggccgc
gccgacctaatgcgcttccttcaggaggagtgctccagccgcggtgcctccatcatctac
gccacccacatctttgacggactggagttctggccctcgcacgtggcatatctggcggga
ggccgcctggctctcttcaaggaggccaagcacctgcccgagctggccgagggccggctg
ctcagcatggtgtacggcctgctcaacgccgaccgcgaggcgcagatcaaggttcgcggc
ccggtgtccacggagtgggaccccagccgcgagggcgaggtgggcaacttctcctatgcc
ttcaacaacggctgggtgccaggcaccatgaacacatcgctctccaccaacgccgtcatg
cggaactag

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