Chlamydomonas reinhardtii: CHLRE_17g731050v5
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Entry
CHLRE_17g731050v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLRE_17g731050v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_17g731050v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CHLRE_17g731050v5
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
TsaE
AAA_30
AAA_25
AAA_24
Motif
Other DBs
NCBI-GeneID:
5727054
NCBI-ProteinID:
XP_001701540
UniProt:
A0A2K3CQY9
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All DBs
Position
17:4333984..4338635
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AA seq
382 aa
AA seq
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MPVPVSVTNPNGKGLVAAAPSSLPTEGPFARLKAAAAANTANGSANGAANGTSQAAPMEV
ERPVQQEITEQPVASTSAPASIEVRGLNFAYPGLDGRPIPGVPPLLRDLTFSLPPGSTCL
LLGANGAGKTTFMKILGGKHMIPEEAVRILGRAPFHDTGLTTSGDLSYIGGNWQRDIAFA
GTSIPLTGDFPAQRMIDSIAGVDPERKKRLIKVLDIDPSWRMHQVSDGQRRRVQICVGLL
KPFKVLLLDEITVDLDVLGRADLMRFLQEECSSRGASIIYATHIFDGLEFWPSHVAYLAG
GRLALFKEAKHLPELAEGRLLSMVYGLLNADREAQIKVRGPVSTEWDPSREGEVGNFSYA
FNNGWVPGTMNTSLSTNAVMRN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttcctgttagcgtaactaacccgaacgggaaaggcctggtcgctgcggcgcca
tcgtcgctcccaaccgaggggcccttcgctcgcctgaaggccgcagccgcagcaaacact
gccaacggctctgcgaatggcgcagctaatggtacaagtcaagcggcgcccatggaggtg
gagcgaccggtgcaacaggaaatcacggagcagcctgtggcgagcaccagcgctcccgcc
agcatcgaagtgcgtggcctcaacttcgcctaccctggcctcgacggccgccctattcct
ggtgtgccgccgctgctgcgtgacctgaccttctcgttgccgcctgggtccacgtgcctg
ctgctgggagccaacggcgccggcaagacgacgttcatgaagatcctgggtggcaagcac
atgatccccgaggaggctgtgcgcatcctgggccgcgcgcccttccacgacaccggcctc
accacatcgggtgacctctcctacattggcggcaactggcagcgcgacatcgcgttcgcc
ggcacctccatcccgctcaccggcgacttcccggctcagcgcatgatcgactccatcgcg
ggcgtggaccccgagcgcaagaagcggttgataaaggttctggacatcgaccccagctgg
cgtatgcaccaggtgtcggacgggcagcgccgccgtgtgcagatctgtgtgggcctgctg
aagcccttcaaggtgctgctgcttgatgagatcacagtggacctggacgtgttgggccgc
gccgacctaatgcgcttccttcaggaggagtgctccagccgcggtgcctccatcatctac
gccacccacatctttgacggactggagttctggccctcgcacgtggcatatctggcggga
ggccgcctggctctcttcaaggaggccaagcacctgcccgagctggccgagggccggctg
ctcagcatggtgtacggcctgctcaacgccgaccgcgaggcgcagatcaaggttcgcggc
ccggtgtccacggagtgggaccccagccgcgagggcgaggtgggcaacttctcctatgcc
ttcaacaacggctgggtgccaggcaccatgaacacatcgctctccaccaacgccgtcatg
cggaactag
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