Magallana gigas (Pacific oyster): 105319220
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Entry
105319220 CDS
T03920
Name
(RefSeq) beta-1,4-galactosyltransferase 4
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00510
N-Glycan biosynthesis
crg00513
Various types of N-glycan biosynthesis
crg00514
Other types of O-glycan biosynthesis
crg00515
Mannose type O-glycan biosynthesis
crg00533
Glycosaminoglycan biosynthesis - keratan sulfate
crg00601
Glycosphingolipid biosynthesis - lacto and neolacto series
crg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
105319220
00513 Various types of N-glycan biosynthesis
105319220
00515 Mannose type O-glycan biosynthesis
105319220
00514 Other types of O-glycan biosynthesis
105319220
00533 Glycosaminoglycan biosynthesis - keratan sulfate
105319220
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
105319220
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crg01003
]
105319220
Enzymes [BR:
crg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
105319220
2.4.1.90 N-acetyllactosamine synthase
105319220
Glycosyltransferases [BR:
crg01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
105319220
Glycolipid
105319220
SSDB
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Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
105319220
NCBI-ProteinID:
XP_011414959
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Position
2
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AA seq
357 aa
AA seq
DB search
MITISRRYAVSFLALGKRSVPMAILVIYIGFVTFALFNYRMHCIFTEPSTLIKYHLLEKE
EADKLCRIPLDSLGVEDVDIFHDHDLNSIQHQNPLVIKGGEGKPEDCVSYQKVAIIVPYR
NRYFHLKLLLSRLHPLLRKQKIHYRIFVIEQATDDSFNRGKLMNVGFKEALKEDQYDCFV
FHDVDMIPENNKNLYLCDDHARHLSSAIDEMRYHVMYYNYAGGVIAMKKDVFKVINGYAN
SYWGWGNEDDDLSARIQEAGYLLTRPPEHIGRYKMVRHKKESRSENGYERFLGWRGRWLQ
DGLHSPKTMTYKVLSKSNEPLYTNITVDLLYDKNKEINVAEDTTKESLWWFLKFYFP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgattacaatatccagacgatatgctgtgtcctttttggcacttgggaaaagaagtgtg
cctatggcaatattggtgatatacataggctttgtaacatttgctttatttaattatcga
atgcactgtattttcacggaaccatccacactgataaaataccatttactggaaaaggag
gaggcagataagttgtgtagaattccattggattctctaggtgttgaagatgttgacatt
tttcatgaccatgatttaaattcaattcaacaccagaatccgttggtgataaaaggggga
gagggaaagccagaagattgtgtgtcataccagaaagtggccattattgttccatacaga
aaccgatattttcatttgaaattgttactctctagacttcatcctttgcttaggaagcag
aaaattcattaccgcatatttgtcatagaacaggccacagatgacagctttaacagagga
aagctgatgaatgtaggattcaaggaggcactgaaggaggaccagtatgactgcttcgtt
ttccatgacgttgacatgataccagagaataacaaaaatttgtatctatgcgacgatcat
gcaagacatttgtcatctgctattgatgagatgcgttatcatgtgatgtattataattat
gccggtggagtaattgccatgaaaaaagatgtgttcaaagtaattaatggttatgccaat
tcctactggggatggggaaatgaagatgatgacctctcagccagaatacaagaagcaggg
tatttattaacgaggccaccagaacatatagggagatataaaatggtacgccacaaaaag
gaatcaagatcagaaaatggatatgagcgtttcctaggctggcgaggaagatggcttcaa
gatggcttacacagtcctaagaccatgacttacaaagtcctcagcaagtccaacgaaccg
ctctacaccaacattacagtagatcttttgtatgataaaaacaaagagatcaacgtggct
gaggatactacaaaggagtcactgtggtggtttctgaaattttattttccataa
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