Magallana gigas (Pacific oyster): 105320309
Help
Entry
105320309 CDS
T03920
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105320309
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crg01007
]
105320309
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crg03016
]
105320309
Enzymes [BR:
crg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
105320309
Amino acid related enzymes [BR:
crg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
105320309
Transfer RNA biogenesis [BR:
crg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
105320309
Prokaryotic type
Other AARSs
105320309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Det1
Motif
Other DBs
NCBI-GeneID:
105320309
NCBI-ProteinID:
XP_034305473
LinkDB
All DBs
Position
4:46601064..46617441
Genome browser
AA seq
1278 aa
AA seq
DB search
MSQSLPTTNISFPNEEEKILKYWKEIDAFRSSLKQSKGKPRYTFYDGPPFATGLPHYGHI
LAGTIKDVVTRWAHQTGYHVERRFGWDCHGLPVEYEIDKTLGIKGPEDVEKMGIAAYNAE
CRKIVMRYSTEWEEIVTRLGRWIDFENDYKTMYPTFMESIWWVFKELYNRGLVYKGSKVM
PFSTACNTPLSNFESGQNYKDVVDPAVIVNFPLLDDPNVCIIAWTTTPWTLPSNLSVCVN
PDLDYVKVKDKSTGKVYIMMEARLVSLFKNEDEYTILERFKGKTLEGKKYEPIFPYFKHM
REQTNAFRVLVDDYVTAESGTGIVHQAPYFGEDDYRVCLKYGIISRDMKIICPVDASGKF
TSDVTDFKGQYVKEADKHIIKHLKGNGRLVHQSTFKHSYPFCWRSETPLIYKAVPSWFVR
VEQATTQLLENNQKTYWVPDFVKEKRFANWLREARDWAISRNRYWGTPIPLWISEDGEEV
VCVGSVEELKKLSGVEVKDLHRESVDGITIPSKLGKGVLRRTPEVFDCWFESGSMPYAQV
HYPFEKKKEFDDTFPADFIAEGIDQTRGWFYTLLVLSTLLFGKPPFKNLIVNGIVLAEDG
NKMSKRLKNYPDPMLIVHKYGADALRLYLCNSPAVKAEGLKFKEEGVERVLKDVFLPWYN
AYRFFMQNVDRYQTEEGLEFLYNENKLTKRSNYKDRWIMSLAQSLIKFVRVEMQAYRLYT
VMPRLVKFVDQLTNWYVRMNRKRLKGEGGPEDCKEALETLFSVLMTMIRLMAPMIPYITE
NMFQSLRQLIDPESVGTQDIRSVHFLMIPSYREDLIDVSIETAVSRMQSVIELGRVIRER
NTLPLKYPLKEVVAIHRDPEALNDIKSLQSYIMEELNVREVKVTQDKSSYGAHLVAEADF
KTLGAKLKGAVKTIAKAVKELTDSQLEEYQRTGEITVAGHTLGEGDLKLMYKFDSSKEGA
KSSYDAHSDKEVLVLIDIVPDQSMLDEGVAREVINRVQKLRQKGGLVPSDKITVYYKASE
NLDKIIKEFSDYIGNAIKQPLVPFPVPASETVYIQENMDVKKDKLEMAIVKQGGESSGAN
TTVSFLPPAPAKAAPFCKFVNVVLVGMPSQEGVEGNQATVLLENPSGNGVKDIQTLTDQI
KSVFGVRGRRVVMYTDAGLKNDLPSTTKPDTLSGQTLYVGPMVGTQGVQHTAVATPACHF
VNVENSKGGSKKGTLLLENPRGNTFNVDQLLAQVSAVYNLNGKNVTLSRTKDKAGAVTPD
SVKNLLDLHGSTLQLLVQ
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatctctgccaacaacaaacatcagttttcctaatgaggaggaaaaaatcctg
aaatactggaaagaaatagatgccttccgttcatcattaaagcaatcaaaaggcaaacca
aggtacacattctatgatgggcccccgtttgctacaggcctgcctcattatggacacatt
ctggctgggaccatcaaggacgtggtgacacgctgggcccaccagaccggataccacgtg
gagaggaggttcgggtgggactgtcacggtctgcctgtggaatatgagatcgacaaaaca
ctgggtatcaaaggccccgaggatgtggagaagatggggatagccgcttacaacgcagag
tgtaggaagattgtgatgagatactccacagagtgggaggaaatagtaacccgacttggt
cgttggatagactttgagaacgactacaagaccatgtaccccaccttcatggagagcatc
tggtgggtgttcaaggagctctacaaccggggactagtttacaaagggtcaaaggtcatg
cccttctccacggcctgcaacaccccactgtccaactttgagtccggacagaattacaag
gatgtggtagacccagcagtcatcgtgaactttcccctcttggatgaccctaacgtgtgc
atcatcgcctggacaaccacaccttggacattgcctagcaacctgtcagtgtgtgtgaac
cctgacctggactatgtcaaggtcaaagacaaatctacaggaaaagtttacatcatgatg
gaggcacggctggtttctctgttcaagaatgaagacgaatacacaattctagagaggttt
aaaggaaagaccctggagggaaagaaatatgagcccattttcccatattttaaacatatg
agagagcagaccaacgccttcagagtcctggtagatgactatgtcacagcggagagtggt
acagggattgtccaccaagctccttactttggagaggatgattacagggtgtgtctaaag
tatggtatcatttccagagacatgaagatcatctgccctgttgacgcttctggaaagttc
accagtgatgtcacagacttcaaaggccaatatgtcaaggaagcagacaagcacatcata
aaacacctgaaggggaacggccgtctggtgcatcagtccaccttcaaacatagctaccca
ttctgctggagatcggagactccactaatctacaaagcggtgccgagttggtttgtgcga
gtggagcaggctaccacacaactgttggagaataaccagaagacatactgggtgcctgat
tttgtgaaagagaagagatttgctaactggctgcgagaggcacgtgattgggcgatatct
cgtaacaggtactgggggacacccatccctctctggatcagcgaagatggagaagaggtt
gtgtgtgttgggtcggtggaagagttgaagaagctgtctggagtggaggtcaaggacctt
catcgggaatcagtggatggtatcactattccttccaaactcgggaaaggagttttgaga
cggaccccggaagtgtttgactgttggtttgagagtggaagcatgccctacgcccaggtt
cactatccctttgagaaaaagaaggagtttgatgacaccttccccgctgacttcattgct
gagggcatagaccagaccagaggatggttctacacactactggttctgtccacattgctg
tttgggaaacctccattcaagaatctcatcgtcaacggaattgtcctggcagaagatggt
aacaagatgagcaagagattaaagaactacccagacccaatgctgattgtacataagtat
ggtgctgatgctctcaggctgtacctgtgtaactcccccgcggtgaaggctgagggtctg
aagtttaaggaggagggggtagagagagtactaaaggacgtgttcctgccctggtacaac
gcctacagattcttcatgcagaacgtggaccgctatcagacggaggaggggctggagttc
ctttacaatgagaacaagctcaccaagcgctcgaactacaaggaccgatggattatgtcc
cttgcccagtcactcatcaagttcgtcagagtggagatgcaggcatatcgcctgtacaca
gtgatgccaagacttgtcaaatttgtggaccagctcacaaactggtatgtcaggatgaac
agaaagaggctcaagggagagggaggaccagaggactgtaaggaagctctggagacattg
ttctctgtcctgatgaccatgatcaggcttatggcgccgatgattccgtacatcacagag
aacatgttccagagtctgagacagctgatagaccctgagtctgtggggacacaggacatc
cgcagtgtccacttcctgatgatcccctcttacagggaggatctgatagacgtctccata
gagacagcagtgtcccgcatgcagtccgtcatagaactgggtcgcgtcatcagagagaga
aacactctccccctcaagtaccccctcaaagaggtggtggccatccaccgagaccccgag
gccctgaacgatatcaagtccctgcagtcctacatcatggaggaactcaacgtccgagag
gtcaaggtcactcaggacaaatccagctatggtgcccacctggtggctgaggccgacttc
aagacactgggagccaagctaaagggagcagtgaaaaccattgctaaagctgtgaaggaa
ttaacggactctcagcttgaagagtaccagagaacaggggaaatcactgtggctggtcac
acactgggagagggcgacctgaagctgatgtacaagtttgacagcagcaaggagggggcc
aaaagttcctacgacgcccactctgacaaagaggtattggtgttgatagatatagtcccc
gaccagagcatgttggatgagggcgtggccagagaggtcatcaaccgagtccagaaacta
cgacaaaagggaggactagtgccatctgacaagatcaccgtgtattacaaagcctctgag
aatctggataaaatcatcaaagaattcagcgactacatcggtaatgccatcaaacagcca
ctcgttccattccctgtccctgcatcagagacggtctacatccaggagaatatggatgtg
aagaaagataagctggagatggctattgtgaagcagggtggggagtcaagtggtgccaac
accactgtcagcttcctgcctcccgccccagcaaaggcggcccccttttgcaagtttgtg
aatgtggtcctggtgggaatgccttcacaggaaggagtggagggaaatcaggccacagtc
ctcctggagaatccctcagggaacggggtcaaggacatccagacactgactgaccagatc
aaatccgtttttggagttcgaggaagaagggtggtaatgtatactgatgctggactgaaa
aatgatcttccatccaccaccaaaccagacacactttcgggtcagactttgtatgttggg
ccaatggtggggacacagggagtccagcatacagcagtggcgacacctgcctgtcatttt
gtgaatgttgagaattcaaaaggaggcagtaagaaagggacactacttttagaaaatccc
cgaggaaacacctttaacgtggatcagcttcttgcacaggtatcagcagtttataattta
aatggaaagaatgtcacattaagtcgtacaaaggacaaggcaggggcagtaactccagac
agtgttaagaacctgctagatttacatggctcaacactacagcttctggtgcaataa
DBGET
integrated database retrieval system
