Magallana gigas (Pacific oyster): 105321187
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Entry
105321187 CDS
T03920
Name
(RefSeq) sodium channel protein 1 brain isoform X10
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
105321187
Ion channels [BR:
crg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105321187
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
PFF1_TM
FAM176
Zip
IQ
SelP_N
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
105321187
NCBI-ProteinID:
XP_019920019
LinkDB
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Position
6:11246870..11296548
Genome browser
AA seq
1920 aa
AA seq
DB search
MAMKGKDGDKNHLSPNDHCVIAGKDGRVSPALSWRPSSARSSRVGDEEEPKDLFRQYVQR
SWDEQLHREKEAQKKLDKNNGKAVAHLVDGELKFEEDEEESKKTRDPALQEGNILPDELG
DEFPSELYGKPLEEIDKYIKDKTFVAIAPRFSNKYIHRFHATKALGLLTPWNPVRKLSVY
IATNQFFDYLVILTILCNCVFLAMPDDPASETAEYVFLGIYTMECVVKILARGLIINKFT
YLRDPWNWLDFIVIISAYITIVIDMTSTPSAEGEEDGSVFNPQMLRTFRVLRALKTVSIV
PGLKTIVGALLRAFKLLFEVIILTTFCLMIFALFGLQVYLGVLRQKCVADVPAYTATASL
SNTAYYNDWIKNSSNWYQNEEGEYLICGNASASGECPGGYTCLPDIGENPNYGYTSFDHF
GWAMLTSFQLITLDFWEDTYNKVIRAMGPLNVLFFVIVVFFGSFYLINLMLAVVAMSYEE
EAVNTNREKEEKERKEAVKDAKAKDAKDAKEKEAKEAKEAKEKEDAKEKEAKATKWKPPE
DTKQSNGTNNNKDSKDSKQPNAVKNSTPRYIMVVSSSGIHLGDSDDTESAKQKPKKPPPK
IIKGSLKNSGEESTGKNEPNTLVDRNHECLAGCCKCYIPWLRVQNLVFILVSDPLFDLFI
TFCILINTIFMGIEYHNMPQGLVDATTWANFVFTIIFTLEAVLKLCAFGKFYFSNGWNNF
DLVIVVASWLDFGLSDVEGVNVIRTFRLLRVFKLAQAWRTMRVLLSIIMNTLGALGNLTV
ILVIIIYIFAVIGLQLFRNSYTADKFGEDGVPRWNFNTFFHALMLIFRILCGEWIEELWN
CMRAADELCMVVFLPTLVFGYFIVLNLFLALLLNAFGSESLKGGDTDAEDDKLALAFAKI
RNLCCCCCSKFRKKTARTASVGPDEMDEEKQIGMTDLEDDKQAKDKPVANGTVKANGVKH
KDGKEEVDEAFKAKRDKFSDFDAARKASKAKDSTASNSGSTSKAEKDGKDSKEKKDKDGM
ALGAEADGMDDEDDENKETVVEDCLPPFCMAKCLKLTGHALWSDFDESNFGKKWNKFRFF
MCKIVEHKAFEYFILVCIGLSSMSLAFEDVYLYTRPELEAALYYTNIIFAVLFTVEMLMK
WVALGFKKYFTSFWTILDFAIVVISLASLIADATGGEDISAFRSLRTLRAFRPLRAISRW
QSMRIVVNALMLAIPAILNVLVVCMVFWLIFSIMGVQFFSGRFYKCKDSSGEVLLPSVVA
NKSQCLAMAATHNYSWVNSNINFDNVLNGYLALFQVATYEGWMEVMDDAIDSTKVDEQPS
FENNLFMYLYFVAFIIFGSFFTLNLIIGVIIDNFNALKKKYDGSALDMFLTQGQKNYMNT
LKKLGSKKPQKTIKRPKARGCLAAIQAVFYDVSVSSKFDLCIVIVIFLNMIAMAVDHYKM
TDYVSNILDILNILFTTIFTLECVIKIIGLRHHYFRQPWNVFDFVVVVLSLLVLIVEAAG
IVLADVLANSFNPTLLRVLRVFRIGRVLRLIKAAKGIRKLLFALIISLPALINIGALLCL
IMYIYAIIGMSVFGNMKIELPMDDTVNFQTFANSFVLLLRLSTSAGWNDILETMFLSEPD
CDPDFATRPDGVSRFKYSTGDCGSPAFGVFYMVSYILIIFLVVINMYIAIILENFNQAHE
AEEVGITEDDFDEFYVVWEKYDPLATQFIKYEHLSHFVGELDPPLGIPRPNEIALVAFDL
PIVEGDKIHCLDVLIALCKNVLGRVEETEEFKELKSQMEEKFQETFPTRVNTSKTSSTMQ
KKKEDVAAKTLQRAWRTFKTQKQLRNLTKMALQKAEADENDKNSKTRGASLANLGKRLNS
ALSNFFSSSRPSSATSRHSIKSQTTLTTPGNSQRMSKSTLQVPAVGPIYPTKGSDKELEL
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaagggaaaagatggtgacaaaaatcatctaagccccaacgatcactgtgtt
atcgcaggaaaggatgggcgggtttctccggccctgtcgtggcgtccctcgtccgctcgg
agctccagggtgggggacgaggaggaacccaaggacttattccgacagtacgtccaacgg
tcatgggacgaacagcttcacagggaaaaggaggcccagaaaaagttagacaagaacaat
ggcaaagcagttgcccatctcgtggacggtgagttaaagtttgaggaggatgaggaggag
agtaaaaagactcgggaccctgccctgcaggaggggaatatcttgccggacgaacttggg
gatgaattccctagcgaactctatgggaaacccttggaggaaattgacaaatatatcaaa
gacaagacttttgtggcgatcgctcctcgcttcagtaacaaatacattcaccgattccat
gcaaccaaagctctggggctcttaacgccttggaatccagttagaaaattgtctgtgtac
attgccaccaatcagttttttgactatctagtcatattgacaattttgtgtaattgtgtc
ttcttagctatgccagatgaccctgcctcagaaactgcagaatatgtctttctaggaatt
tataccatggaatgtgttgtaaaaattctagcacgtggtttaataataaacaagtttaca
tatttacgagatccctggaactggttggattttatcgtcattatatcggcatatatcacc
atagtcatagatatgacgtcaactccaagtgcagaaggagaagaggatggaagtgttttc
aatcctcagatgttacgaactttccgagtgttgcgagctctcaaaacagtctccatagtt
ccagggctgaagacaattgtgggtgcattactgcgggctttcaaacttttattcgaagtc
atcattctaaccaccttctgtctgatgatctttgccttgttcggtcttcaagtgtacctg
ggagtcctgcgacagaaatgcgtggcagatgtcccagcatacactgcaaccgcctccctg
tccaacacagcttactacaacgactggatcaaaaactcttctaattggtaccagaatgaa
gaaggagaatacttgatttgtggcaatgcctcagcatcaggtgaatgccccggcggatac
acctgccttccagatataggagagaaccccaactatggctacacaagcttcgaccatttt
ggttgggctatgctgacttcgttccagctgatcactctggacttctgggaagacacttat
aacaaggttatccgagcgatgggtccgttgaatgtcttgttcttcgtgattgttgttttc
tttgggtcgttctacctgatcaaccttatgctggccgttgtagcaatgtcatatgaggag
gaggcagtcaacaccaatagggaaaaagaggaaaaggaaaggaaagaagctgtgaaagat
gctaaagcaaaagatgcaaaagatgccaaagaaaaagaagctaaagaggctaaagaagct
aaagaaaaggaagatgcaaaagaaaaggaagctaaagccacaaaatggaaaccaccagag
gacacaaaacagtcaaatgggaccaacaacaacaaggactccaaagattcaaaacagcca
aatgcagtgaaaaatagcacccctcgatatattatggttgtttcctcttcgggcatacat
cttggtgatagtgatgacactgaatcagccaagcagaagccaaagaaaccacccccaaag
atcatcaaaggaagcttaaaaaacagtggtgaagaaagcacaggaaaaaatgagcccaat
accctagtggaccgtaaccacgagtgtctggcagggtgctgcaagtgctacatcccttgg
ctgagggtccagaacctggtctttatccttgtctctgaccccctgtttgacctgttcatt
accttctgtatcctgatcaacaccatctttatgggaatagagtaccacaacatgccacag
ggactcgtggatgccaccacatgggccaactttgtcttcactattatttttactctggag
gctgtgttgaagttgtgtgcttttggaaagttttacttctccaatggctggaacaacttt
gatctggtaatcgttgtggccagctggctggactttgggctgtctgatgtggaaggagtc
aacgtcatcaggacattcagactgttgagggttttcaagttagcccaagcctggcgcacc
atgagggttttgctgagcatcattatgaacactcttggagctttaggaaatctaactgtc
atccttgtaattatcatctacatcttcgcagtgataggactccagttgtttagaaatagc
tacactgcagataaatttggagaggatggagtaccaagatggaatttcaacacgtttttc
catgccttaatgctgattttccgaatcctgtgtggtgagtggatagaggagctgtggaac
tgtatgagggcggccgatgaactctgcatggtggtgttcctacccacactcgtgtttgga
tacttcattgttctgaaccttttccttgccttgttactcaatgctttcgggagtgaatct
ctgaaaggaggggacactgatgcagaagacgataagctagctctggctttcgccaagatc
agaaatttgtgctgttgctgctgtagtaaattcaggaaaaagacggcaagaaccgcctct
gtgggaccggatgagatggatgaggaaaaacagattgggatgacagacttggaggatgac
aaacaagccaaggataaacctgtagcaaatggaactgtgaaagcaaatggcgtcaaacac
aaggatggaaaagaagaagttgatgaggcatttaaagctaaaagagacaagttttctgat
tttgatgcggcacggaaagcctctaaagcaaaggattcaacagcaagtaactctggaagt
acatcgaaagcagagaaggatggtaaagactccaaggagaagaaagataaggatggcatg
gcccttggagctgaagctgatggtatggatgatgaagacgatgaaaacaaagagaccgtg
gtagaggactgccttcctccattctgcatggcaaaatgtttgaaattgactggccacgct
ctttggtcagactttgatgaatcaaactttggaaaaaaatggaacaaatttcgtttcttc
atgtgtaaaatagttgagcacaaagcttttgaatatttcattcttgtgtgcattggcttg
agcagcatgtcactggcctttgaagatgtttatctctatactcgcccagagctcgaggct
gctctgtactacaccaacatcatctttgctgtgctcttcaccgttgaaatgttgatgaag
tgggttgccttaggatttaagaaatacttcaccagcttctggacaattctagattttgcc
attgttgtaatctctttagctagtctgatagcagatgctactggtggtgaagatatatca
gcattcaggtcactcaggactctccgggcatttagacctttgagggcaatatcaagatgg
cagagcatgaggattgtggtgaatgccttgatgttggctatcccagctatcttgaacgtg
ctggtggtctgcatggttttctggctaatcttcagtataatgggtgtccagttcttttct
gggcggttctacaaatgcaaggattcctccggggaggtactattgccgagcgtggtggcc
aacaagtcgcagtgtctggctatggctgccacccacaactactcctgggtcaactccaat
atcaactttgacaatgttctcaatggctacttggctttgtttcaagtggctacttatgaa
ggttggatggaggtgatggatgatgcaatagattctacaaaggtggatgagcagccaagc
tttgagaacaacctcttcatgtacctatattttgtggcattcatcatttttggctccttc
ttcacactcaacttgattattggtgtcatcattgacaactttaatgcattgaagaaaaag
tatgatggcagtgccttggacatgttcttgactcaaggtcagaagaactacatgaacaca
ctaaaaaagcttggatccaaaaaacctcagaaaaccatcaaaagaccaaaggctcggggt
tgtctggctgctatccaggccgtcttctacgatgtctccgtgagctccaagtttgaccta
tgcatagtgattgtgatattcctgaacatgatagcaatggctgtcgaccattacaaaatg
actgattacgtctccaacatcctggacattctcaacatcctcttcacgactattttcacc
cttgagtgcgtgatcaagatcatcggcctgcgacatcactacttcagacaaccctggaac
gtctttgactttgtggttgtcgtcctgtcactcttggtattaattgtcgaggcagcaggc
attgtgttggcagatgttctagccaatagctttaacccgacactgcttcgagtcctgaga
gtgtttaggataggtcgtgtgttgagactgatcaaggcggcaaagggcatccggaagctg
ctgtttgctctcatcatctccttaccagccctgatcaacatcggcgctctgctgtgtctg
atcatgtacatttatgccatcatcgggatgtcagtgtttggtaacatgaaaattgaactt
ccgatggatgacactgtcaatttccaaacatttgccaacagttttgtgctgcttctgcgt
ctgtcaacatcggcgggttggaacgacattttggagaccatgtttttaagtgaaccagat
tgtgaccctgactttgccactcgtccagacggagtgtcgcgtttcaagtactccacaggc
gactgtggttctccggcgtttggagtgttttacatggtttcgtacattcttatcattttc
ttagtggtgataaacatgtatattgctatcatcctggagaatttcaaccaagcccatgag
gcagaagaagtaggaataacagaggatgactttgatgaattttatgtggtatgggagaaa
tatgaccctctagctacccagttcatcaaatatgaacatctttctcactttgttggggag
ctagatcccccattaggtattccaagacctaatgaaatcgctctagtggcatttgatctt
ccaattgttgaaggagacaaaattcattgcttggacgtgttgatagcattatgtaaaaat
gtgttgggccgagtggaggaaacggaagaattcaaggagctgaagtcccagatggaagag
aagttccaagaaaccttcccaacacgtgtcaacacaagtaaaacatcgagtacgatgcag
aaaaagaaagaagacgtggctgcaaagacattacagcgtgcctggagaacattcaaaact
caaaagcagctccgaaacctcaccaagatggcactgcaaaaagcagaggccgacgaaaat
gataaaaactctaaaaccagaggtgcaagtcttgctaatcttggcaagcgcctcaatagt
gctttaagcaacttcttcagctcatcaaggccaagtagtgcaacaagcagacacagtatc
aaaagtcaaactacattgaccaccccagggaattctcagaggatgtccaaaagtacttta
caagtgccggccgtgggtcccatctatccaacaaaaggatcagataaagagttggaatta
tga
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