Magallana gigas (Pacific oyster): 105325144
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Entry
105325144 CDS
T03920
Name
(RefSeq) beta-1,3-galactosyltransferase 5 isoform X2
KO
K00739
acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase [EC:
2.4.1.147
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00512
Mucin type O-glycan biosynthesis
crg01100
Metabolic pathways
Module
crg_M00056
O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
105325144
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crg01003
]
105325144
Enzymes [BR:
crg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.147 acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase
105325144
Glycosyltransferases [BR:
crg01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
105325144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
105325144
NCBI-ProteinID:
XP_011422867
LinkDB
All DBs
Position
5:8904598..8926759
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AA seq
350 aa
AA seq
DB search
MRVMKKSFNSCFRNLSAGNIRVQLVVLNSLCLVLMVFALMYTNNVHRTPPSHSQPYECKE
DFGYGKASLEEIISGTAQQLDHPNFTYIRNANKTCIPNSDVILLILVKSAVGHFRKRQYI
RETWGKDARKRGFKIAFLLGFSKFEDAIVGIENGLHEDLIQQNFEDSYVNNTHKIKMALS
WISEYCKQAKYILIVDDDMYVNIPNTISFILQEAVSPDEDFYSGHLIPEPYPDRCLKSKH
FISKTQYPFACYPPYIAGGSILLNKYTVEQFVRVMQFIPYLPFDDVFLGFIAQKLGIEPT
NNAYISLEERTTNANDIKNFISQHGYNTNILFRIAYNNTHMQMKTVIKLV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtaatgaagaaaagtttcaactcctgcttcagaaatctttcagcggggaacatt
cgtgttcagctagtcgttctgaattccttgtgtttagtactcatggtctttgcgctaatg
tataccaacaacgttcatcgtactcccccttctcattctcagccttatgagtgcaaagag
gatttcgggtatggaaaagcatctttggaagaaataatctcaggaacagcccaacaatta
gaccacccaaattttacgtacatcaggaatgccaataaaacctgtataccaaattctgac
gtgattctactgattttagtgaagtctgctgttggacattttagaaagaggcagtatatc
agagaaacatggggtaaagacgcaagaaaaagaggattcaaaattgcttttcttttaggc
tttagcaaatttgaagacgctatcgtaggtatcgaaaatgggctccacgaggaccttatt
caacagaacttcgaggattcctacgtaaataatacgcacaaaatcaagatggcgttatcc
tggatatctgaatattgcaaacaagcaaaatacattctcattgttgacgatgatatgtat
gtgaatattccaaacacaataagctttattttacaagaagccgttagtcccgatgaagat
ttctacagtggacatcttattcctgagccctatccagatcgctgtctcaaaagcaagcat
tttatttcaaagacccagtatccatttgcttgttatccgccttatatagccggtggtagc
atattactaaacaaatacacggtggaacagttcgttagagtaatgcaattcattccttac
ctgccatttgatgacgtgtttcttggatttatcgctcaaaaactggggattgaacctacc
aataatgcttatataagcttagaagaacgcaccacaaatgcaaatgatattaagaatttt
atttcgcaacatggatataatactaatattttgtttcgaattgcatataacaatacccat
atgcaaatgaaaacggtaataaaattggtttaa
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