Magallana gigas (Pacific oyster): 105327021
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Entry
105327021 CDS
T03920
Name
(RefSeq) short transient receptor potential channel 7 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
105327021
Ion channels [BR:
crg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105327021
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
YVC1_C
Ank_5
PigL_N
DUF7310
DUF447_C
CTXphi_pIII-N1
Motif
Other DBs
NCBI-GeneID:
105327021
NCBI-ProteinID:
XP_034306475
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Position
4:22314495..22321678
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AA seq
924 aa
AA seq
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MTKKQKSVHILSERLRPGLQDVERKYLESCELGDENFVKNVLNSGRVSADIEDTQGRTGL
DISIENGHVSLVDYLLSKVSPKVIHQGLLCAIEYDREEICEILLNHPIYQTTHKDRDGVK
SNEYSTIQGITSPNEVTAPDDDDLSMRSDISKFSELPVFNMLKEALIKAAIRNDFQIVQM
IMMKGALVDIPHDYFCSCTSCIEEQNRDYMVFCNRRLDTFRALASPAYISLTDEDPVMSS
FFLSKKFKQLQVMETEYKSTYEELDLQVQNFTLDLLNQCRTSEEVRSLLNSTEMTDANTN
SFPLLQVALQMEQKKFVSHPKCQAQVSALWFSGLTGMRHLNRFEFLLLSIPLGMIFLPIL
SLVFIFVPWSKVTLLLNPPSTRFLSYTCSYITFLCLVVLGKIQFSNMWVSLGCEHSDPFT
YVFITLIFMWIIGWIWEEMKQLFEQGAGNYFRSVWNIIDSLMLTFLLTSFTLDVVVPIRL
QSSLAQHQINFNVSGEEININQLLFCYDVDNKNNYFSTERQCPTATIGVDWATSWVPDPE
LISDIMFSAGIILSIARISFIMPANETFGTMLVSFRRTFGDLVKLLAMFVLILLSFSCGL
AALYAAHACQTAHFQGFSAVTFVLIWSLLGFGEGNTPNLNRSAPLSSITNNSSRITLTEW
FGYAIYGLYVFAAIVVLMNLLIAVMSNTFQEVQDERDTEWKFSRTELWMTFIEPGCPVAP
PFNIIPSIQNICEAWKKLCCLCSKSRCRTVKKQQYDLEMRCAPDASTPRQSVICALIQRY
IVHASRAKLEDDEDVTEDRLRRLIERTASRLEKRLDEITGHVQHVDDHVSHVDKGERDIQ
QLQKEEMQRTNTLIKAQEEYIELLKSKWKEGERFREQRLQEVMSMRAQRERLLQQHMFEE
AHRLEEVITDTLEEADYIPRTTLT
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaaacagaaatctgtccatattttgtctgaaagattgagaccaggcttgcag
gacgtcgaaagaaagtatttagaatcatgtgagctgggagacgagaattttgtcaaaaat
gtgttgaattcaggaagagtctctgcagatattgaagacacacagggaagaactggactt
gatatatcaatagaaaatggacacgtttccttggtagattaccttttgtccaaagtcagt
ccaaaagttatccaccagggacttctatgtgctatagaatacgatcgggaagagatatgc
gagattcttttgaatcacccgatttaccaaaccacacataaagatagagacggggtgaaa
agcaacgaatattctaccatacaaggcatcacatctccaaatgaggttacagcacccgat
gatgatgatttatcaatgaggtcggatatttccaaattctccgaattgcctgttttcaat
atgctcaaagaggcgttgattaaagcagccatacggaatgattttcagatcgttcaaatg
atcatgatgaaaggagcattggtagatattcctcacgactatttctgttcttgtacatca
tgtattgaagagcagaacagggattacatggtcttttgtaacagaagacttgataccttt
cgagctctggcaagtccagcatacatttctctaacagatgaagatcctgtcatgtcttcc
ttcttcctcagcaaaaagttcaaacaacttcaagtcatggaaactgagtacaagagcacg
tatgaagagcttgacttgcaggtacaaaacttcactcttgacttgttgaatcagtgtcgt
acttcggaggaggtgaggtcgcttttaaactcgacggaaatgaccgatgcaaacaccaat
tcttttcctctactgcaggttgcattgcaaatggagcaaaagaagtttgtctctcaccca
aaatgccaggctcaggtatcagctctttggtttagtggacttacagggatgcgtcacctg
aatcgttttgaattcctgctgctgtctattccacttggaatgatatttttacccatttta
tccctggtttttatatttgtaccatggagcaaagttacgcttttgctgaacccaccttcc
acccgtttcttgagctatacatgttcctacataactttcctgtgtctggttgtgttgggg
aaaatccagtttagtaacatgtgggtgtcacttggttgcgaacattccgacccatttaca
tacgtttttattacactgatttttatgtggatcatagggtggatttgggaagaaatgaaa
cagttgtttgagcaaggagcaggcaattacttccgctctgtgtggaatatcatcgactct
ctcatgcttacgtttttgttgacctctttcactttggacgtcgttgtccccattaggttg
caaagttcgctagctcaacaccagattaatttcaatgtatctggtgaagaaatcaacatc
aatcaacttctcttctgctatgatgttgacaacaagaataattatttttcgacggagagg
caatgccctacggctacgattggtgttgactgggctacaagttgggtcccagaccctgaa
cttatctctgatataatgttttctgctgggataattctaagcattgccagaatatctttc
attatgcctgccaacgaaacatttggaacaatgctcgtttcatttagaaggacttttggt
gacttggtgaaactgttagccatgtttgttctaatcttgcttagtttttcgtgtggactc
gccgctctctatgctgcacatgcgtgccagacagcacactttcaagggtttagtgctgtg
acctttgttttgatttggtcactgctgggttttggcgaaggaaatacccctaatttaaat
cgcagtgcccctctaagttccattacaaacaactcatcacgcatcacattaacggaatgg
tttggatacgcaatttatggtctatatgtgtttgctgctattgttgttttgatgaacttg
ttgatagctgtaatgagcaatactttccaagaggtccaggatgagagagacacggagtgg
aagttttcacgtacagaattatggatgacttttattgaacctggctgtccggtagccccg
cccttcaacatcattccttccattcaaaatatttgtgaagcttggaaaaaactgtgttgc
ctatgtagcaaaagcagatgtcgtactgttaaaaaacaacagtacgatttagaaatgaga
tgcgcaccagatgcaagcactcctcggcagagtgttatatgcgccttaatacaaaggtat
atagttcatgcatctcgcgcaaaactggaagatgatgaagatgtcacggaagacagacta
cgaagactgatagaaagaacagcgtcacgactagaaaaacgattggatgaaattacaggt
cacgtgcaacatgtagatgatcacgtgtctcatgttgacaaaggtgaacgggatatccaa
caacttcaaaaggaggaaatgcaaagaactaacactctcataaaagcacaggaagaatac
atagaactattgaagtcaaaatggaaggagggggaaaggttcagagaacagcgattacag
gaggttatgtcaatgcgcgcgcaaagagagcgacttctccaacaacatatgtttgaagaa
gcacatcgactagaagaggtgatcacggacactctagaagaggcggattatattccaaga
acaactctaacataa
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