Magallana gigas (Pacific oyster): 105328926
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Entry
105328926 CDS
T03920
Name
(RefSeq) vitamin D3 receptor isoform X1
KO
K08539
vitamin D3 receptor
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105328926
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105328926
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105328926
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105328926
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105328926
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
105328926
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Zn_ribbon_FGT1_2
DUF5044
Motif
Other DBs
NCBI-GeneID:
105328926
NCBI-ProteinID:
XP_011428273
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Position
8:12575587..12670098
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AA seq
472 aa
AA seq
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MFSEYNGHHVPPHYGGPHGPPPPHHHGGHMPPTGHHHPMAGPPQSYSPYMRPRMDPTSDV
FTCLFGDLFVKCFEDSNSNTMPSMANPYHRPMDLGSNDLAHKARKNKEDKYCGVCGDRAL
GYNFDAISCESCKAFFRRNAPKGLEYFKCPYEEKCKMDVSNRRFCKRCRLRKCFEIGMRK
EYILTEEEKLRKRQRIEENRLIQKVRDVDKTKTQSGIVSTTENRLRALEPDEEYMINEVV
GAYRQSLEVSIASELPKDKPQMHMKDLVNIAELSVRRVIDMAKKIKSFKALSQTDQISLL
KGGSIELLILRSVISFDKEKNQWLDPLDSEDHSMNMKNLQEGEGATLFAEHMKFTKSLAV
DLKADETMLILLLVISLFSPDRPNISDKSYVCQEQEKYALLLLRYLESRYSPYTVRAIYP
KLLMKLTDIRDLNEEHSHVLLKVNPEGIQPLMKEVLDMNLKDTITGNCESPM
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgagtacaatggtcaccatgtccccccacactatgggggacctcacggacct
cctcctccccaccatcatgggggacacatgccccccactgggcaccaccacccaatggct
ggaccacctcagtcctactccccgtacatgagacccagaatggaccccaccagcgatgta
tttacctgtctctttggtgacctcttcgtcaaatgctttgaagattcaaacagcaacacc
atgccaagcatggcaaatccgtaccatcgaccaatggacttgggttcgaatgacttggca
cataaggcacgcaagaataaagaggataaatactgcggcgtgtgtggggaccgagctctt
ggatacaactttgatgccatatcctgcgagtcttgcaaggcgttcttcagaagaaacgca
ccgaaaggactggaatatttcaagtgtccatatgaggaaaaatgcaagatggacgtctca
aaccggcgattctgcaagcgctgtcgtcttaggaaatgcttcgagattggcatgcgtaag
gaatacatcctgactgaagaagagaaacttcgaaaaaggcagcgaatagaagagaacagg
ttgattcagaaagtacgagatgtagataagacaaagacacagtctgggattgtgagtacg
acggaaaacagactacgcgcactggagcctgatgaggagtatatgataaacgaagtggtg
ggagcttatagacaatctttggaggtgtccatcgcttccgaattgccaaaagacaaaccg
caaatgcacatgaaagacttggtaaacattgcagagctgagtgtacgtcgagtaatagac
atggcaaagaaaatcaaatcatttaaggcattgtcgcaaacagatcagatcagcctgctc
aaaggaggctcgatcgagctgcttattctgaggtcagtgatctcattcgacaaggagaag
aaccaatggctggaccccttagacagcgaggaccactccatgaacatgaagaacctccag
gaaggagagggcgccactttgtttgcggaacacatgaagttcacaaagtccctggctgtt
gacctgaaggcggatgaaaccatgttgattctcttgctggtcatctccctgttctcgccg
gacaggcccaatatcagtgacaaatcgtacgtttgccaggagcaggagaagtatgctttg
ttacttttacgttacctagaatctaggtactctccatacacagtgcgtgccatttacccg
aaattgttgatgaagctgacagacattcgtgatctgaacgaggagcattctcacgtcctg
ctgaaggtcaaccccgagggcatacagcccctcatgaaggaggtcctggatatgaatcta
aaggacaccatcactggaaactgtgaaagcccaatgtga
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