Magallana gigas (Pacific oyster): 105329852
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Entry
105329852 CDS
T03920
Name
(RefSeq) F-box/WD repeat-containing protein 7
KO
K10260
F-box and WD-40 domain protein 7
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105329852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105329852
04121 Ubiquitin system [BR:
crg04121
]
105329852
Membrane trafficking [BR:
crg04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
105329852
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105329852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_SCAP
DSE1_N
Beta-prop_WDR41
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
HHH_3
Beta-prop_EML_2
F-box-like
ASA1
ANAPC4_WD40
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Aladin
F-box
Beta-prop_NOL10_N
Beta-prop_SPT8
CFAP251_N
TRM82_WD
Beta-prop_VPS8
Vts1
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_IFT140_2nd
HHH
CDtoxinA
PsbU
BLM_N
Paf1
Motif
Other DBs
NCBI-GeneID:
105329852
NCBI-ProteinID:
XP_065933002
LinkDB
All DBs
Position
2:complement(48015553..48023827)
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AA seq
752 aa
AA seq
DB search
MASKKVDINTATLQDFAQLCGIGVRKAQAIIKYRKAVGGFTTISDLSDVPGLGYGIIEQS
RNCLVCTVASKCRLRAAARGRKSRSDVETAENDVSIESPQPSTSTGRALRSRLIETPSTS
QSDDSLTLSHGKFDGGSHSEAVRVKKEVEKDDEAEDEEEEEEEEDSSHEENGPQLSDDDV
SSPTEIDSAPPSPQENRRLQRVHPPRSRIPVLVGKMKRKSYGCREEVWIPPFKRPCRSDD
FDSQSTFGNLKKTTIIPSYAGGHRPRIPSKEHPPPRLMEWLQTFQMWSNAERLMAVDELI
QICEPTQVRHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKALLKAAQTCRYWRVLAED
NLLWREKCKEEGITETLVYGSNRLRRRTGSRSPWKALYMRQHQIEQNWRAAELRSPKLLR
GHDDHVITCLEFCGSRVVSGSDDNTLKVWSVITGKCLRTLVGHTGGVWSSQMEDNIIISG
STDRTLKVWNADTGQCINTLYGHTSTVRCMHLHKNIVVSGSRDATLRVWDIHSGVCKHVL
MGHVAAVRCVQYDGKRVVSGAYDYMVKVWDPETETCIHTLQGHTNRVYSLQFDGVHIVSG
SLDTSIRVWDVESGNCLHTLIGHQSLTSGLELKDNILVSGNADSTVKVWDITTGQCLQTL
QGPNKHQSAVTCLQFNKKFVITSSDDGTVKIWDLKSGDFLRNLVSLDSGGSGGVVWRVRC
SNTKLVCAVGSRNGTEETKLLVLDFDVEDKKT
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaagaaggtagatattaacacagccactttacaggactttgcccagctctgt
ggaataggggtccgaaaggcacaagctatcattaagtacagaaaagctgtagggggtttc
accacaatatctgacttgagtgacgtcccaggtctgggttatggcatcatagaacagagc
aggaactgcctggtgtgtacggtggcgtccaagtgcaggctgcgggcggctgcaaggggg
aggaagtcaagaagcgatgtagagacagcagagaatgatgtttcaattgaatcccctcaa
ccctccaccagtaccggccgggcattgaggtctcgtctcattgagacccccagcacatca
cagtcagatgacagcctcaccctgagtcatggaaagtttgatggaggctcccactcggag
gcagtgagggtgaagaaggaagtagagaaagatgatgaggcagaagatgaagaggaggag
gaggaggaagaagattcgagtcatgaggaaaatgggccccagctgtctgatgatgatgtg
agtagtcccacagaaatcgactcagcacccccctctccacaggaaaatcgacgcttacaa
cgagtccatcccccacgttcacggatacctgtacttgtgggcaagatgaaaagaaaaagc
tatggttgtagagaagaagtttggatccctccatttaaaagaccttgtcgatcagatgac
tttgacagtcaaagtacatttgggaatttaaaaaagactacaatcattccatcctatgct
ggaggtcatcgtcctagaattccatccaaagaacacccccctcccagactcatggagtgg
ctacaaacatttcagatgtggagcaatgcagagcgtctgatggcggtagatgagctgata
cagatctgtgaacccactcaggtgcgacacatgatgcaggtcatcgagcctcagttccaa
agggacttcatctcactacttccaaaagagttggcattatacgttctatcattccttgag
cccaaagccctgttaaaggcggcccagacctgtcgttactggcgggtcctggcggaggac
aatcttctgtggagggagaaatgtaaggaggagggaatcacagagaccctggtgtacggc
tccaaccgtctccggcgccgcacgggaagtaggagtccttggaaggccctgtatatgagg
cagcatcagatcgaacagaactggagggcagctgaactcaggagtccaaagcttttgcgg
ggacatgatgatcatgtgataacgtgtctagagttctgtggctctcgggtggtcagtggt
tctgatgacaacacactcaaagtatggtctgtcatcacaggcaagtgcttaaggaccttg
gtgggacacacaggaggggtatggtcctctcagatggaagacaacatcatcataagtggc
tcaacagaccggacactcaaggtgtggaacgcggacacggggcagtgtatcaacacactg
tatggccacacctccacggtcaggtgtatgcacctccacaaaaacatagttgtgagtggt
tctagggatgccacactcagagtgtgggacatccacagtggtgtttgtaaacacgtgtta
atgggtcatgtggcggcagtgcggtgtgtgcaatacgatgggaaacgggttgtcagtggt
gcttacgattacatggtgaaagtgtgggacccagagacagagacttgtatccacactctg
cagggacacaccaacagggtctactccttacagtttgatggggtccacattgtgagtgga
tccttggacacctccattcgagtgtgggacgtggagtctgggaactgtctacacacattg
attggtcaccagtcattgaccagtggactcgagctgaaggacaacatactggtctcagga
aacgctgactcaacagtcaaagtgtgggacatcacaacaggccagtgcttacaaactcta
caagggccaaacaaacaccaaagtgccgtcacgtgtctgcagttcaacaagaagtttgtg
atcacatcatcagatgacggaactgttaaaatatgggacttaaaatcgggggactttctg
aggaacctggtctctctggacagtggggggagtgggggggtcgtgtggagagtcaggtgc
agtaacaccaaactcgtgtgtgcggtgggcagtcgaaacggcacagaggaaaccaaactg
ttagtcctggactttgacgtagaggacaaaaagacttga
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