KEGG   Magallana gigas (Pacific oyster): 105329853
Entry
105329853         CDS       T03920                                 
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    105329853
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crg03021]
    105329853
Transcription machinery [BR:crg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     105329853
SSDB
Motif
Pfam: AFF4_CHD AF-4
Other DBs
NCBI-GeneID: 105329853
NCBI-ProteinID: XP_065932999
LinkDB
Position
2:47980551..48013392
AA seq 1218 aa
MDARNSMEKKKEQARREREIQARMFKEEQRKNVFPTNTGLFSEPVKKTTIDPIAKRVQDT
LGKCRPEYSDAIGITHQPATPLPKDKRMPFHNVDTKRPDHRTQYPKPKPETTDGAKRPVE
EKSNPKNHSKSYSYKGYLEKQRNTASHDQISTSDKKLHPPAPSSTLSSGHKQDHQNQNHQ
GKKETLSPSPVKREQVTPVKNGPVNGCSSEEKGKISTNKIKVQPTNGLLKPKNANLPRLH
IKKETDHSVEEILKEMTQWHQPHTAIQTPHKDEMKFPFPSSPPTNGTVKVHGTLKKESNA
SELQTKRNPDVEEDRTSPARNLSHLRYPERDKAAESTVKTQSTPSSRPTNSASGPGTNAP
TKEQRMNTGDSSSSSEDESDSNESDSESQSSEEDEKSDDNEEEDDDDDDDDEEDEEEEKA
PATLKSSVNSSASDKEHDTSKSSTCSTWALSNFIKTNVESPISQLPSSNDNSKLSDKPNT
TTSEKDNEQVIDDLLNHIDDHTGGLGWSPVVYPTKHKHTQQKSPFSSYSTRQPSPSKSSN
RTSSSEKSERLKTSTPEMKGRIPRKKVREPALSSEESQSENEEVDVESVTPGKEIIPEIL
RRNAGSVSEVTKRLSFENGASDTLNQVTPSSEKRNKAKERRDQKFPTRRQGKENKENNDK
KNASCDDIKNIIDQITVNPPLSPIPNVPENSNPKPSIPGLTYDSCGKPSIIVRFNLSVAK
PSVKCNTSPSPLCSGFKNEKLCSDVKSELSDSDMDIDDDIVDSKDLIECPKPISPHHNNT
TVPFSSHYSPLTMNGDITSGKRKSDSDFLENDKKRAKSEKKTSKRNSLGNSRERISHTND
HEWDMKHPQRSGVKERRSSSSSNSSQRSSTSTRAKKTKNQSTEPDITSHQMNDKEELEVP
GNGPENSGQYPSSVEMTSYSRGGEGDVAHVPSPQTRKSAKVVDEWCALSPDTYLQLAREL
KHQADNMNSDKLQKAMKYLESFIAFVQCGMAMERTNSDQTKIFNMYRDTLKFVSHISQRR
GSHESNNNMSTKEKIISVLSLRIQSLLNMKLYKLKKNDTLKLKRVIEDYNKSTVSKPPPA
PPISHAPSPHQNSWSSRLNRTPSPMSPTPSPAGSTGSLESRGSSIDLTPSKLPNGNVHMS
PATITYPQRIHSITQQYITSTGYLVQSHDLWDQADVIMQEVKGFFDDLDEHSESLTLLCS
IQDLVCYLQKVVEKLKDT
NT seq 3657 nt   +upstreamnt  +downstreamnt
atggacgcaagaaacagcatggagaagaaaaaagagcaagcacgtagagagagggagata
caagctcggatgtttaaggaggagcagaggaaaaatgtctttccgacaaatacgggcctt
ttctcagagccagtgaaaaagactaccattgacccaatagccaagagggtgcaagacacc
ttggggaagtgtaggccggaatattctgatgctattgggattacccatcaacctgccaca
cccttaccaaaggacaaaaggatgccctttcataatgttgacacaaaaagaccagatcat
agaactcaatatccaaaacctaaaccagagactacagacggagccaaaagacctgtagaa
gagaaatcgaaccccaaaaatcactcaaaatcatattcttacaaaggttaccttgagaaa
cagcgtaacactgcatcgcatgatcaaatctccacctcagacaagaaattacatccacct
gctccatcgtccactttgtccagtggccacaaacaagatcatcaaaaccaaaatcaccaa
ggaaagaaggaaaccctgtcccctagccctgtcaaaagggaacaggtcacgccagtgaag
aatggcccagtcaatggatgcagcagtgaggagaagggaaaaatcagcaccaacaagatt
aaagtccagcccacaaatggcctactgaaacccaaaaatgccaatcttccacgtctccat
attaaaaaggagacagatcatagtgttgaagaaattctgaaggaaatgacccagtggcat
cagcctcatacagcaatacagacacctcacaaagacgaaatgaagtttccatttccatcc
agtccacccaccaatggcacagttaaggtacatggcacacttaagaaggaaagcaatgca
tctgaactccaaaccaaaagaaatcccgatgtagaggaagataggacttctccagctaga
aatctatcacatctgcgatatccagagagagacaaagcagctgaatcgacagtgaaaaca
caaagtacacccagttccaggccaacaaattctgccagtggaccaggcaccaatgcccca
acaaaggaacaaagaatgaacactggggattctagcagctcttcagaagatgaatcggat
agcaatgaatctgatagtgagagtcaatcctcagaggaagatgaaaagagtgatgacaat
gaggaagaagatgatgatgatgatgacgatgatgaagaggatgaggaagaagagaaggct
ccagccactcttaaatcctcagtgaattcatcagcctcagataaagaacatgacacatca
aaaagttcaacttgctccacatgggcattaagtaacttcattaaaacaaatgtggaatct
ccgatctcccagcttcccagttccaacgacaattccaaattgtcggataaacctaataca
accacatcagagaaagacaatgaacaagttatagatgacctgttgaatcatattgatgac
catacaggggggctgggatggtcccctgtggtgtaccccacaaaacacaaacatactcaa
caaaaatcaccatttagcagttatagcacacgtcaaccatctccatctaaatctagcaat
cgaacttcatcaagtgagaagagtgaaagactcaaaacctccacccccgagatgaagggt
cgtattcctaggaaaaaagtgagggagccggctttgtcatctgaggaatcacagagtgaa
aacgaagaggtagatgtagaatcagtgactccagggaaggaaattattcccgaaatactg
agacggaatgcagggtctgtctcagaagtgacaaaacgtttgagttttgagaatggggct
agtgatactttaaatcaagtgactccaagtagtgaaaagaggaataaggccaaagagaga
agagaccaaaagttcccaacaaggagacaagggaaagaaaataaagaaaataatgataag
aaaaatgccagttgtgatgatattaagaatataatagaccaaattactgtgaatccaccc
ttgtcaccgataccaaatgttccagaaaattcaaatccaaaaccttcaattccaggttta
acttatgatagttgtggtaaacccagcattatagttcgtttcaacctgtcagtagcaaaa
cctagtgtcaaatgcaatacttccccaagtcctttgtgttcaggttttaagaatgaaaag
ctgtgttcagacgttaaaagtgaactgagtgatagtgacatggatatagatgacgacatt
gtagattccaaggatctcattgagtgtcctaaacccatatccccacaccataataatacg
acagtgccattctcatctcattactcgcctcttacaatgaatggtgatattactagtgga
aaacggaaatcagactcagactttcttgaaaatgacaaaaaacgtgctaaaagtgaaaag
aaaactagcaaacggaacagtttaggaaattctcgagagagaataagtcacacaaatgac
cacgagtgggatatgaagcatccacaaaggtcaggggtcaaggagcgaaggtcaagctcc
agtagtaattctagtcagcgcagtagcaccagtactcgagccaagaaaaccaaaaaccag
agcaccgaaccggacataaccagccatcagatgaacgacaaggaggagttagaggttcca
ggtaatgggccagagaacagtggtcagtatccttcatcagtggagatgaccagctactcc
cgagggggtgagggagacgtagcacatgtccctagtccccagacccgaaagtcggccaaa
gtcgtcgatgaatggtgtgccctctccccagatacctacctccagcttgctcgggagctg
aagcaccaggcagacaacatgaatagtgataagctacaaaaagccatgaagtatttagag
tcctttatagcctttgttcagtgtgggatggccatggaacgcaccaattcggaccagacc
aaaatctttaacatgtacagggacaccctcaaatttgtctcgcacataagccaaaggaga
ggaagtcatgagtccaacaacaacatgtccaccaaggagaaaatcatatcagtattgagc
ttgagaatccagtctctgttgaatatgaagctgtacaagctgaagaaaaatgatactctg
aaactgaaaagagtaattgaggattataacaagagtacggtctctaagccaccaccagcc
ccgcccatcagccacgccccctcacctcatcagaacagctggagcagccgcctaaacaga
accccctcaccgatgtcccccactccctccccagcgggcagcacagggtcactggaatcc
aggggcagtagcattgatctcaccccatctaaacttcctaatggaaacgtgcacatgtcc
ccggccaccattacgtaccctcagcgcatacattccatcactcagcagtacatcacatcc
actggctacctggtgcagtcacatgacctctgggaccaagccgacgtcatcatgcaggag
gtcaaagggttctttgacgatttagatgagcactcagaatccctgacacttttatgcagt
atacaagacctggtctgctatctgcagaaagtggttgagaagttaaaagacacttga

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