Magallana gigas (Pacific oyster): 105333355
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Entry
105333355 CDS
T03920
Name
(RefSeq) isoleucine--tRNA ligase, mitochondrial isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105333355
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crg01007
]
105333355
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crg03016
]
105333355
Enzymes [BR:
crg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
105333355
Amino acid related enzymes [BR:
crg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
105333355
Transfer RNA biogenesis [BR:
crg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
105333355
Prokaryotic type
Other AARSs
105333355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1e
tRNA-synt_1_2
Motif
Other DBs
NCBI-GeneID:
105333355
NCBI-ProteinID:
XP_034326134
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All DBs
Position
6:complement(28563321..28591704)
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AA seq
985 aa
AA seq
DB search
MPLLTTKHLRLPWIKCHLSLQTCLYCDNVKDKKSKPTGNKYRDTVYLPKTDFVLSLKKAG
DGFKKSELSELYKWQQNENRNKQFILHDGPPYANGKLHVGHAINKVLKDIINRYNLLQGY
RVHYVPGWDCHGLPIELKALKKSKKQTLSDQSIRAMSKTFAEESIQVQKEGFQEYGVMAD
WEGQCYRTMDPLYEAQQLDVFYAMYEKELIYQGYMPVYWSPSSRTALAEAELEYDPGFVS
KAVYVKFPVTADTLEACFSLNDAEKSQVFALIWTTTPWTLPANEAICFGSDLTYCLVKNL
CNDELYICGKEFVDQLHSILPGESKIIQEIKGSAFKDFKYINPLKQLMDPSMDVQELPFL
EGDHVTADVGTGLVHTAPAHGQEDFQKGMQYGLPVDTLVDETGRYTSETGPLLEGKRVHV
DAEDTVISLLKDHIILQESYKHSYPIDWRTKKPVILRACKQWFIDTSKLQQQAMECMKDI
KVYPESLRQNMDAQLKRKYWCISRQRVWGVPIPVFYHRDTEEVLINREIFDHVRDLISKH
SSNCWWNMSVEELLPQEILSRNGLGNSSDYRKGSDIIDIWFDSGTSWASVLSDDKVADVY
LEGLDQFRGWFQSSLLTSVAYRGKAPFKKLVVHGFAVDEEGHKMAKSVGNVVDPGQIING
HSKATGIPYGLDVLRLWVANSGLQTKVAIGTNILDIHQEELFQLRKMLRHLLGSLRGFDV
NILQTNYSDLLPQDQYLLSLLYSYGTQVTSMYEEYRFGRVLTLLQKFLSDLSKVYITISK
DRLYCDSVQSPGHRSSLFVLYHTLEVLTKSIAPILPSLAEEVYKFHPQKKTSPLFHTLWY
HLNPNWNNPDIEKLMSTAFTIRDKMNEVLVSEPMGNYDAIVIAKSQLYSELKKLQDAETS
MDSPLCEILQTASTTLKSSQSGEVTADDKDIVIHGSHADTQTEFTVILTKAGGSKCDRCR
RNTAQSNELCQRCYDVLLRNSQLSP
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgcctctactcacaactaagcatttgcgattgccatggattaagtgccacttgtcatta
cagacgtgcttatactgcgataatgttaaggacaagaaaagtaaaccaacaggaaacaaa
tacagggacaccgtctatttgccaaagacggactttgttttgagtctgaagaaggcggga
gatgggtttaaaaaatcggagttaagtgaactttataagtggcagcaaaatgaaaacaga
aacaagcaatttattctacatgatggacctccatatgcaaatggcaagctacatgttgga
catgcaattaataaggttctaaaagacataatcaatcgctacaacttgcttcaagggtac
agagttcattatgttcctggatgggattgccatggtctgccaatagaattgaaagcttta
aaaaagagcaaaaaacagacactctctgatcagtccatccgagccatgtcaaagacattt
gccgaggagtccatacaagtccagaaggagggattccaggagtatggggtgatggcagac
tgggaggggcaatgttaccggaccatggaccccctttacgaggctcaacagcttgatgtg
ttttatgccatgtatgagaaggaactgatatatcaaggttacatgcctgtgtattggtct
ccatcttcaagaactgctttagcagaagcagaattagaatatgaccctggttttgtcagt
aaggctgtgtacgtcaaatttccagtgacagcagacacgttagaggcatgtttttcttta
aatgatgctgagaaaagccaagtatttgccttgatctggaccacaaccccatggaccctg
cccgctaatgaagccatttgttttggatctgatttaacgtactgtctggtgaaaaatctt
tgtaatgatgaactgtatatatgtgggaaagagtttgtggatcaacttcattctatttta
cctggagaatcaaagattattcaagaaataaaaggatctgctttcaaagactttaaatat
ataaatccattgaaacaattaatggatccttctatggatgtacaagagttacctttcttg
gagggagatcatgtgactgccgatgtaggcaccggattggtccataccgccccggctcac
ggacaggaagattttcagaagggaatgcagtatggtctccctgtggacactcttgttgat
gagacaggaagatacacatctgaaacagggccacttttggaaggaaaaagagttcatgtg
gatgcagaagatacagttatttcactactaaaagatcacatcatattacaagagagctat
aaacacagttatcccattgactggagaactaagaaacctgttattttacgggcctgtaaa
cagtggttcatagatacaagcaaactacagcaacaagccatggagtgtatgaaagatatc
aaagtctatccagaatcactgcgtcaaaacatggatgctcagctaaagagaaagtactgg
tgcatctcccgccagcgagtctggggtgtgccgatccccgtcttttatcaccgcgacact
gaggaagttctcatcaatagagagatttttgatcatgttcgagatctaatatcaaagcat
agttcaaactgctggtggaacatgtctgttgaagaactgttacctcaggaaattctctct
aggaatggccttgggaatagcagtgactacaggaaaggaagtgacatcattgacatttgg
tttgacagtggaacttcctgggcatcagttctctcagatgacaaggttgctgatgtgtat
ctggagggtctggatcagttccgtggatggttccagtcctctctactgactagtgtggcc
tacagagggaaagctccatttaagaagttagtggtccatggttttgcagtggatgaagaa
ggacacaagatggcgaagtctgtagggaacgtggtagatccagggcagatcatcaatgga
cacagtaaggcaactggtatcccatatggacttgatgttctaagattgtgggtggcaaac
tctggtctgcaaactaaggtagccattggcaccaacatactggatattcatcaggaggag
ctgtttcagcttcggaaaatgttgcgccatctcctgggaagcctgaggggatttgatgta
aacattctccagacaaactacagtgatctcctgcctcaggaccaatatctgctgtcactg
ctctacagttacggaacccaggtgacttcaatgtatgaagaatatagatttggaagagtt
ttgacacttcttcagaaatttctcagtgatctttccaaggtctatattactatatcaaaa
gacagattgtactgtgacagtgtccagagccccggacaccgatcctctctgtttgtcctc
tatcacactctggaagtcctgactaagtccatcgcccccatactaccatccctggctgag
gaagtctacaagtttcacccacagaaaaagacttcaccattgtttcacaccctctggtac
catctaaatcctaattggaataacccagacatcgaaaagctgatgtctacagctttcacc
ataagggacaaaatgaatgaagtactagtatctgaaccaatgggaaattatgatgctatt
gtaattgccaaatctcaactttattcagaactaaagaaactacaggatgctgagactagc
atggactcccctctgtgtgaaatactgcagacagcatcaaccacactgaaatcttcccag
tcaggggaagtcactgctgatgataaggacattgtaatacatggttcacacgcagacact
caaactgaatttacagtgatactgacaaaggctgggggctctaaatgcgatcgctgtcga
agaaatacagcccagagcaatgaattgtgccaacgatgttatgatgtacttttaagaaat
agtcaattaagtccatag
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